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WormBase Tree Display for Gene: WBGene00006959

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Name Class

WBGene00006959SMapS_parentSequenceR74
IdentityVersion1
NameCGC_namexbp-1Person_evidenceWBPerson159
Sequence_nameR74.3
Molecular_nameR74.3
R74.3.1
CE40514
R74.3.2
Other_nameCELE_R74.3Accession_evidenceNDBBX284603
Public_namexbp-1
DB_infoDatabaseWormQTLgeneWBGene00006959
WormFluxgeneWBGene00006959
NDBlocus_tagCELE_R74.3
PanthergeneCAEEL|WormBase=WBGene00006959|UniProtKB=A0FLQ8
familyPTHR46542
NCBIgene175541
RefSeqproteinNM_001083177.4
SwissProtUniProtAccG5EE07
UniProt_GCRPUniProtAccG5EE07
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:44WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classxbp
Allele (18)
Possibly_affected_byWBVar02153517
WBVar02153518
WBVar02153519
StrainWBStrain00034061
RNASeq_FPKM (74)
GO_annotation00015196
00015197
00015198
00015199
00015200
00015201
00015202
00015203
00015204
00015205
00015206
00015207
00015208
00015209
00015210
00015211
00015212
00015213
00015214
00015215
00015216
00015217
00015218
00015219
00015220
00015221
00105616
00105624
00105644
00105755
00105848
00105849
00105851
00105854
00105860
00115125
00115126
Contained_in_operonCEOP3865
Ortholog (25)
Structured_description (2)
Modifies_diseaseDOID:10652
Modifies_disease_in_annotationWBDOannot00000237
Molecular_infoCorresponding_CDSR74.3
Corresponding_CDS_historyR74.3:wp166
R74.3a:wp275
R74.3c:wp275
Corresponding_transcriptR74.3.1
R74.3.2
Other_sequence (21)
Associated_feature (16)
Gene_product_bindsWBsf019101
Transcription_factorWBTranscriptionFactor000096
Experimental_infoRNAi_result (50)
Expr_patternExpr3424
Expr4095
Expr7648
Expr1017530
Expr1032970
Expr1155684
Expr2018089
Expr2036227
Drives_constructWBCnstr00011392
WBCnstr00012793
WBCnstr00034070
Construct_product (11)
Regulate_expr_clusterWBPaper00005432:xbp-1(zc12)_downregulated
WBPaper00005432:xbp-1(zc12)_upregulated
WBPaper00059175:hlh-17p-XBP-1_downregulated
WBPaper00059175:hlh-17p-XBP-1_upregulated
AntibodyWBAntibody00001600
Microarray_results (30)
Expression_cluster (170)
Interaction (117)
WBProcessWBbiopr:00000039
WBbiopr:00000046
WBbiopr:00000050
WBbiopr:00000079
Map_infoMapIIIPosition-3.69579Error0.005385
PositivePositive_cloneR74Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Mapping_dataMulti_point5012
4785
Pseudo_map_position
Reference (132)
RemarkSequence connection from [Ron D]. krb 14/11/01
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene