WormBase Tree Display for Gene: WBGene00003698
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WBGene00003698 | SMap | S_parent | Sequence | F35E8 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | nhr | ||||||
Allele (104) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00034521 | ||||||
00034522 | |||||||
00034523 | |||||||
00034524 | |||||||
00034525 | |||||||
00034526 | |||||||
00034527 | |||||||
00111589 | |||||||
00111590 | |||||||
00111591 | |||||||
00111592 | |||||||
Ortholog (34) | |||||||
Paralog (217) | |||||||
Structured_description | Concise_description | nhr-108 encodes a nuclear receptor that is most highly conserved amongst nematode species. | Paper_evidence | WBPaper00027309 | |||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 17 May 2007 00:00:00 | ||||||
Automated_description | Predicted to enable DNA-binding transcription factor activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Expressed in head neurons; intestine; neurons; pharyngeal gland cell; and tail neurons. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F35E8.12 | |||||
Corresponding_transcript | F35E8.12.1 | ||||||
F35E8.12.2 | |||||||
Associated_feature | WBsf653465 | ||||||
WBsf978340 | |||||||
Transcription_factor | WBTranscriptionFactor000256 | ||||||
Experimental_info | RNAi_result | WBRNAi00031790 | Inferred_automatically | RNAi_primary | |||
WBRNAi00014338 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00046358 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr7540 | ||||||
Expr10190 | |||||||
Expr1025689 | |||||||
Expr1150239 | |||||||
Expr2014005 | |||||||
Expr2032245 | |||||||
Drives_construct | WBCnstr00012685 | ||||||
WBCnstr00035935 | |||||||
Construct_product | WBCnstr00035935 | ||||||
Microarray_results (18) | |||||||
Expression_cluster (66) | |||||||
Interaction | WBInteraction000187074 | ||||||
WBInteraction000205985 | |||||||
WBInteraction000229613 | |||||||
WBInteraction000444349 | |||||||
WBInteraction000512487 | |||||||
Map_info | Map | V | Position | 9.28375 | Error | 0.016118 | |
Positive | Positive_clone | F35E8 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Mapping_data | Multi_point | 4525 | |||||
Pseudo_map_position | |||||||
Reference | WBPaper00027309 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |