WormBase Tree Display for Gene: WBGene00001998
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WBGene00001998 | SMap | S_parent | Sequence | F32A11 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | hpr | ||||||
Allele (124) | |||||||
Strain | WBStrain00040708 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00020113 | ||||||
00020114 | |||||||
00020115 | |||||||
00020116 | |||||||
00020117 | |||||||
00020118 | |||||||
00020119 | |||||||
00020120 | |||||||
00020121 | |||||||
00020122 | |||||||
00020123 | |||||||
00109854 | |||||||
Ortholog (36) | |||||||
Structured_description | Concise_description | hpr-17 encodes the C. elegans homolog of the S. pombe Rad17p and S. cerevisiae Rad24p DNA repair and cell cycle checkpoint proteins. | Paper_evidence | WBPaper00003353 | |||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 14 Jun 2011 00:00:00 | ||||||
Automated_description | Predicted to enable chromatin binding activity. Predicted to contribute to DNA clamp loader activity. Predicted to be involved in DNA damage checkpoint signaling; DNA repair; and mitotic DNA replication checkpoint signaling. Predicted to be located in nucleus. Is an ortholog of human RAD17 (RAD17 checkpoint clamp loader component). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F32A11.2 | |||||
Corresponding_transcript | F32A11.2.1 | ||||||
Other_sequence | AF076840 | ||||||
CRC11790_1 | |||||||
CR09751 | |||||||
Associated_feature | WBsf666303 | ||||||
WBsf990345 | |||||||
WBsf224146 | |||||||
Experimental_info | RNAi_result | WBRNAi00077189 | Inferred_automatically | RNAi_primary | |||
WBRNAi00068168 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00064103 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00046067 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00014188 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00027844 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00111951 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1012118 | ||||||
Expr1031163 | |||||||
Expr1149959 | |||||||
Expr2012587 | |||||||
Expr2030823 | |||||||
Drives_construct | WBCnstr00036530 | ||||||
Construct_product | WBCnstr00036530 | ||||||
Microarray_results (19) | |||||||
Expression_cluster (134) | |||||||
Interaction (32) | |||||||
Map_info | Map | II | Position | 14.5882 | Error | 0.083821 | |
Positive | Positive_clone | F32A11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 4980 | |||||
4770 | |||||||
5032 | |||||||
5728 | |||||||
Pseudo_map_position | |||||||
Reference (12) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |