WormBase Tree Display for Gene: WBGene00020109
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| WBGene00020109 | SMap | S_parent | Sequence | R151 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | der-2 | Person_evidence | WBPerson2876 | |||||
| Sequence_name | R151.6 | ||||||||
| Molecular_name | R151.6 | ||||||||
| R151.6.1 | |||||||||
| CE39620 | |||||||||
| Other_name | CELE_R151.6 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | der-2 | ||||||||
| DB_info | Database | AceView | gene | 3I312 | |||||
| WormQTL | gene | WBGene00020109 | |||||||
| WormFlux | gene | WBGene00020109 | |||||||
| NDB | locus_tag | CELE_R151.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020109|UniProtKB=Q21997 | |||||||
| family | PTHR11009 | ||||||||
| NCBI | gene | 176018 | |||||||
| RefSeq | protein | NM_001392140.1 | |||||||
| SwissProt | UniProtAcc | Q21997 | |||||||
| TREEFAM | TREEFAM_ID | TF314715 | |||||||
| UniProt_GCRP | UniProtAcc | Q21997 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 02 Mar 2020 15:25:00 | WBPerson1983 | Name_change | CGC_name | der-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | der | ||||||||
| Allele (23) | |||||||||
| Strain | WBStrain00052444 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00073635 | ||||||||
| 00073636 | |||||||||
| 00073637 | |||||||||
| 00073638 | |||||||||
| 00073639 | |||||||||
| 00073640 | |||||||||
| 00073641 | |||||||||
| 00073642 | |||||||||
| 00073643 | |||||||||
| 00073644 | |||||||||
| 00073645 | |||||||||
| 00073646 | |||||||||
| 00073647 | |||||||||
| 00073648 | |||||||||
| 00073649 | |||||||||
| 00073650 | |||||||||
| 00073651 | |||||||||
| 00105633 | |||||||||
| 00105723 | |||||||||
| Contained_in_operon | CEOP3424 | ||||||||
| Ortholog (40) | |||||||||
| Paralog | WBGene00000843 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable misfolded protein binding activity; signal recognition particle binding activity; and ubiquitin-specific protease binding activity. Involved in IRE1-mediated unfolded protein response. Predicted to be located in endoplasmic reticulum membrane. Predicted to be part of Hrd1p ubiquitin ligase ERAD-L complex. Is an ortholog of human DERL2 (derlin 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R151.6 | |||||||
| Corresponding_CDS_history | R151.6:wp153 | ||||||||
| Corresponding_transcript | R151.6.1 | ||||||||
| Other_sequence (31) | |||||||||
| Associated_feature | WBsf226933 | ||||||||
| WBsf226934 | |||||||||
| Experimental_info | RNAi_result (15) | ||||||||
| Expr_pattern | Expr1016417 | ||||||||
| Expr1038745 | |||||||||
| Expr1155622 | |||||||||
| Expr2005658 | |||||||||
| Expr2023874 | |||||||||
| Drives_construct | WBCnstr00025369 | ||||||||
| Construct_product | WBCnstr00025369 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (65) | |||||||||
| Interaction (18) | |||||||||
| Map_info | Map | III | Position | -0.767964 | |||||
| Positive | Positive_clone | R151 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00003662 | ||||||||
| WBPaper00013426 | |||||||||
| WBPaper00013520 | |||||||||
| WBPaper00033458 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00039837 | |||||||||
| WBPaper00041771 | |||||||||
| WBPaper00052163 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00059773 | |||||||||
| WBPaper00061946 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
