WormBase Tree Display for Gene: WBGene00019329
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WBGene00019329 | SMap | S_parent | Sequence | K02F3 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | ceeh-1 | |||||
Sequence_name | K02F3.6 | ||||||
Molecular_name | K02F3.6 | ||||||
K02F3.6.1 | |||||||
CE28941 | |||||||
K02F3.6.2 | |||||||
Other_name | CELE_K02F3.6 | Accession_evidence | NDB | BX284603 | |||
Public_name | ceeh-1 | ||||||
DB_info | Database (12) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | ceeh | ||||||
Allele (109) | |||||||
Strain | WBStrain00032998 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00009611 | ||||||
00009612 | |||||||
00009613 | |||||||
00009614 | |||||||
00009615 | |||||||
00009616 | |||||||
00009617 | |||||||
00009618 | |||||||
00009619 | |||||||
00009620 | |||||||
00124205 | |||||||
Ortholog (38) | |||||||
Paralog | WBGene00010628 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00007711 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00007854 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00009316 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00011029 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00016506 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00016507 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00017335 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00018077 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00019525 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00021927 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00022258 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00022259 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00022260 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Concise_description | ceeh-1 encodes a soluble epoxide hydrolase (sEH) orthologous to human ABHD7 and ABHD9; recombinant CEEH-1 is biochemically active in vitro on epoxyeicosatrienoic acids and leukotoxins (EpOMEs); conversely, CEEH-1 is inhibited by urea-based antagonists of mammalian sEH that elevate EpOME levels when fed to C. elegans; perhaps because of genetic redundancy with its paralog CEEH-2, CEEH-1 has no obvious function in mass RNAi assays. | Paper_evidence | WBPaper00031511 | |||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 02 Mar 2008 00:00:00 | ||||||
Automated_description | Enables epoxide hydrolase activity. Involved in cellular lipid metabolic process. Predicted to be located in membrane. Is an ortholog of human EPHX3 (epoxide hydrolase 3) and EPHX4 (epoxide hydrolase 4). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | K02F3.6 | |||||
Corresponding_transcript | K02F3.6.1 | ||||||
K02F3.6.2 | |||||||
Other_sequence (25) | |||||||
Associated_feature | WBsf650818 | ||||||
WBsf666541 | |||||||
WBsf991166 | |||||||
WBsf991167 | |||||||
WBsf1014140 | |||||||
WBsf1014141 | |||||||
WBsf226131 | |||||||
Experimental_info | RNAi_result | WBRNAi00016487 | Inferred_automatically | RNAi_primary | |||
WBRNAi00049753 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00006517 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1010341 | ||||||
Expr1038354 | |||||||
Expr1153469 | |||||||
Expr2009855 | |||||||
Expr2028095 | |||||||
Drives_construct | WBCnstr00025912 | ||||||
Construct_product | WBCnstr00025912 | ||||||
Microarray_results (19) | |||||||
Expression_cluster (155) | |||||||
Interaction | WBInteraction000358659 | ||||||
Map_info | Map | III | Position | -25.7742 | Error | 0.001143 | |
Positive | Positive_clone | K02F3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00031511 | ||||||
WBPaper00038491 | |||||||
WBPaper00042257 | |||||||
WBPaper00055090 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |