WormBase Tree Display for Gene: WBGene00020109

WBGene00020109 SMap: S_parent: Sequence: R151
  Identity: Version: 2
    Name: CGC_name: der-2 Person_evidence: WBPerson2876
      Sequence_name: R151.6
      Molecular_name: R151.6
        R151.6.1
        CE39620
      Other_name: CELE_R151.6 Accession_evidence: NDB BX284603
      Public_name: der-2
    DB_info: Database: AceView gene 3I312
        WormQTL gene WBGene00020109
        WormFlux gene WBGene00020109
        NDB locus_tag CELE_R151.6
        Panther gene CAEEL|WormBase=WBGene00020109|UniProtKB=Q21997
          family PTHR11009
        NCBI gene 176018
        RefSeq protein NM_001392140.1
        SwissProt UniProtAcc Q21997
        TREEFAM TREEFAM_ID TF314715
        UniProt_GCRP UniProtAcc Q21997
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:02 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 02 Mar 2020 15:25:00 WBPerson1983 Name_change: CGC_name: der-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: der
    Allele (23)
    Strain: WBStrain00052444
    RNASeq_FPKM (74)
    GO_annotation: 00073635
      00073636
      00073637
      00073638
      00073639
      00073640
      00073641
      00073642
      00073643
      00073644
      00073645
      00073646
      00073647
      00073648
      00073649
      00073650
      00073651
      00105633
      00105723
    Contained_in_operon: CEOP3424
    Ortholog: WBGene00070709 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00023959 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            WormBase-Compara
      WBGene00138883 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00130970 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00225694 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g4223 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g4529 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g15091 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g6887 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g9499 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g15352 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g2999 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g1221 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g2396 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g11766 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g1466 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00096.g4236 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-R151.6 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g19590 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00463.g11699 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_21693 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_008625 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g03860 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g15549 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30285500 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g8112 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00246087 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00275906 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00262914 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00288600 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000002819 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Inparanoid
            OrthoInspector
      FB:FBgn0038438 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-040426-1324 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-050522-90 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:17943 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:14236 Homo sapiens From_analysis: EnsEMBL-Compara
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1917627 Mus musculus From_analysis: EnsEMBL-Compara
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:2151483 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1597373 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:6496100 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog: WBGene00000843 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable misfolded protein binding activity; signal recognition particle binding activity; and ubiquitin-specific protease binding activity. Involved in IRE1-mediated unfolded protein response. Predicted to be located in endoplasmic reticulum membrane. Predicted to be part of Hrd1p ubiquitin ligase ERAD-L complex. Is an ortholog of human DERL2 (derlin 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R151.6
    Corresponding_CDS_history: R151.6:wp153
    Corresponding_transcript: R151.6.1
    Other_sequence (31)
    Associated_feature: WBsf226933
      WBsf226934
  Experimental_info: RNAi_result (15)
    Expr_pattern: Expr1016417
      Expr1038745
      Expr1155622
      Expr2005658
      Expr2023874
    Drives_construct: WBCnstr00025369
    Construct_product: WBCnstr00025369
    Microarray_results (20)
    Expression_cluster (65)
    Interaction (18)
  Map_info: Map: III Position: -0.767964
    Positive: Positive_clone: R151 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (11)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene