Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00003858

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00003858EvidencePaper_evidenceWBPaper00002840
SMapS_parentSequenceK04G7
IdentityVersion1
NameCGC_nameogt-1Person_evidenceWBPerson346
Sequence_nameK04G7.3
Molecular_nameK04G7.3a
K04G7.3a.1
CE25042
K04G7.3b
CE39588
K04G7.3b.1
Other_nameC. elegans OGTPaper_evidenceWBPaper00002840
OgtPaper_evidenceWBPaper00046676
CELE_K04G7.3Accession_evidenceNDBBX284603
Public_nameogt-1
DB_infoDatabase (13)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:33WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classogt
Allele (120)
Possibly_affected_byWBVar02152826
WBVar02157221
WBVar02158442
WBVar02158444
WBVar02158445
Strain (16)
RNASeq_FPKM (74)
GO_annotation00031462
00031463
00031464
00031465
00031466
00031467
00031468
00031469
00031470
00031471
00031472
00031473
00031474
00031475
00031476
00031477
00031478
00031479
00031480
00031481
00031482
00031483
00031484
00031485
00031486
00031487
00031488
00080383
00080384
00080385
OrthologWBGene00054703Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00036497Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00158247Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00120581Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00092732Pristionchus pacificusFrom_analysisOMA
WBGene00225076Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g5162Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g14159Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g2136Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g4310Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g4643Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g16381Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g6870Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g1268Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g17553Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g16324Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g12701Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g27455Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
Cang_2012_03_13_00081.g3753Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-ogt-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold36.g155Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01028.g17715Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_12427Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_009850Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08218Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g15424Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30240600Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIII_pilon.g8089Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00245719Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00305189Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00258925Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00285469Trichuris murisFrom_analysisWormBase-Compara
FB:FBgn0261403Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-030131-9631Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:8127Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:1339639Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:62060Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ParalogWBGene00000244Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00003885Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00017983Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018175Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021444Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021613Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00043992Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptionogt-1 encodes an ortholog of O-linked N-acetylglucosamine (O-GlcNAc) transferase (OGT; OMIM:300255) with 12 N-terminal tetratricopeptide (TPR) domains (generally thought to enable protein-protein interactions) and a C-terminal putative catalytic domain; although loss of ogt-1 activity has no effect on overall viability or fertility, ogt-1 mutations result in alterations in macronutrient storage and can suppress constitutive dauer formation in daf-2 mutants suggesting that, in C. elegans, ogt-1 may play a regulatory role in nutrient sensing and insulin-like signaling pathways; OGT-1 is expressed in embryos, where it exhibits nuclear and punctate perinuclear localization.Paper_evidenceWBPaper00002840
WBPaper00026663
Curator_confirmedWBPerson1843
WBPerson567
Date_last_updated03 Aug 2006 00:00:00
Automated_descriptionEnables protein N-acetylglucosaminyltransferase activity; protein O-acetylglucosaminyltransferase activity; and protein serine/threonine phosphatase activity. Involved in several processes, including dauer larval development; glycogen metabolic process; and lipid storage. Located in nucleus and perinuclear region of cytoplasm. Expressed in several structures, including hypodermal cell; intestine; neurons; and somatic cell. Used to study type 2 diabetes mellitus. Human ortholog(s) of this gene implicated in aortic valve stenosis and non-syndromic X-linked intellectual disability 106. Is an ortholog of human OGT (O-linked N-acetylglucosamine (GlcNAc) transferase).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoExperimental_modelDOID:9351Homo sapiensPaper_evidenceWBPaper00058670
Curator_confirmedWBPerson324
Date_last_updated19 May 2021 00:00:00
DOID:9352Homo sapiensPaper_evidenceWBPaper00028382
WBPaper00026663
Curator_confirmedWBPerson324
Date_last_updated03 Feb 2020 00:00:00
Potential_modelDOID:0080240Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:8127)
DOID:1712Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:8127)
Models_disease_assertedWBDOannot00000733
WBDOannot00000734
WBDOannot00000915
WBDOannot00000916
Molecular_infoCorresponding_CDSK04G7.3a
K04G7.3b
Corresponding_CDS_historyK04G7.3:wp153
Corresponding_transcriptK04G7.3a.1
K04G7.3b.1
Other_sequence (62)
Associated_feature (11)
Experimental_infoRNAi_result (11)
Expr_patternExpr1469
Expr12076
Expr12077
Expr14785
Expr15904
Expr1011594
Expr1031818
Expr1153651
Expr2014617
Expr2032850
Drives_constructWBCnstr00020059
WBCnstr00035826
WBCnstr00042812
Construct_productWBCnstr00020059
WBCnstr00035826
WBCnstr00042812
WBCnstr00042813
WBCnstr00042814
WBCnstr00042815
WBCnstr00042816
WBCnstr00042817
WBCnstr00042818
Regulate_expr_clusterWBPaper00046083:ogt-1(ok1474)_OP50_downregulated
WBPaper00046083:ogt-1(ok1474)_OP50_upregulated
AntibodyWBAntibody00000148
Microarray_results (25)
Expression_cluster (139)
Interaction (58)
Map_infoMapIIIPosition-0.779089Error0.000534
PositivePositive_cloneK04G7Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Mapping_dataMulti_point4355
4557
Pseudo_map_position
Reference (51)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene