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WormBase Tree Display for Gene: WBGene00006839

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Name Class

WBGene00006839SMapS_parentSequenceF09B9
IdentityVersion1
NameCGC_nameunc-115Person_evidenceWBPerson261
Sequence_nameF09B9.2
Molecular_nameF09B9.2a
F09B9.2a.1
CE15759
F09B9.2b
CE02176
F09B9.2b.1
Other_nameCELE_F09B9.2Accession_evidenceNDBBX284606
Public_nameunc-115
DB_infoDatabaseAceViewgeneXK771
WormQTLgeneWBGene00006839
WormFluxgeneWBGene00006839
NDBlocus_tagCELE_F09B9.2
PanthergeneCAEEL|WormBase=WBGene00006839|UniProtKB=Q95QM5
familyPTHR24213
NCBIgene181227
RefSeqproteinNM_077301.9
NM_001029371.8
TREEFAMTREEFAM_IDTF318042
TrEMBLUniProtAccQ95QM5
Q19240
UniProt_GCRPUniProtAccQ95QM5
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:43WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
Allele (111)
Legacy_informationSee also e2225
[C.elegansII] e2225mut : uncoordinated movement, severe kinker. Muscle structure appears normal. OA1: mn481. Cloned: predicted protein has N-term LIMb domain, C-term villin headpiece similarity. [FF; SP]
StrainWBStrain00003646
WBStrain00027092
WBStrain00030542
WBStrain00034392
WBStrain00034399
WBStrain00037520
WBStrain00005032
WBStrain00005254
RNASeq_FPKM (74)
GO_annotation00064003
00064004
00064005
00064006
00064007
00064008
00064009
00088506
00088507
00088508
00088509
00088510
00088511
00088512
00114921
00114922
OrthologWBGene00063125Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00036883Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00145068Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00108280Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00131837Caenorhabditis japonicaFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g2923Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g2924Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g8662Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g17564Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g16076Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g25090Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g12721Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g1837Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g27386Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g15896Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00262.g8066Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-115Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g13685Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00352.g9949Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_01376Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_023530Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g07537Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_X0066500Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrX_pilon.g19857Caenorhabditis elegansFrom_analysisWormBase-Compara
FB:FBgn0260463Drosophila melanogasterFrom_analysisHieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
FB:FBgn0051352Drosophila melanogasterFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-050327-91Danio rerioFrom_analysisHieranoid
Inparanoid
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-070112-1122Danio rerioFrom_analysisHieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-100316-5Danio rerioFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-080219-41Danio rerioFrom_analysisHieranoid
Inparanoid
OrthoInspector
Panther
SonicParanoid
HGNC:78Homo sapiensFrom_analysisHieranoid
Inparanoid
OMA
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:29132Homo sapiensFrom_analysisHieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:19195Homo sapiensFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:1194500Mus musculusFrom_analysisHieranoid
Inparanoid
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:2385758Mus musculusFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:2442582Mus musculusFrom_analysisHieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
SonicParanoid
RGD:1565118Rattus norvegicusFrom_analysisHieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
SonicParanoid
RGD:1565768Rattus norvegicusFrom_analysisHieranoid
OMA
PhylomeDB
RGD:1303094Rattus norvegicusFrom_analysisHieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
Structured_descriptionConcise_descriptionunc-115 encodes a protein that binds actin filaments and that is required for RAS signalling and UNC-40/netrin activity during axon pathfinding.Paper_evidenceWBPaper00005607
WBPaper00005719
Curator_confirmedWBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionEnables actin filament binding activity. Involved in neuron projection morphogenesis; regulation of filopodium assembly; and regulation of lamellipodium assembly. Located in basal plasma membrane and cytoplasm. Expressed in several structures, including PDE; excretory cell; pharynx; somatic nervous system; and vulva. Is an ortholog of human ABLIM2 (actin binding LIM protein family member 2).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF09B9.2a
F09B9.2b
Corresponding_transcriptF09B9.2a.1
F09B9.2b.1
Other_sequence (45)
Associated_feature (16)
Transcription_factorWBTranscriptionFactor000712
Experimental_infoRNAi_result (17)
Expr_pattern (11)
Drives_construct (12)
Construct_productWBCnstr00007698
WBCnstr00018995
WBCnstr00020818
WBCnstr00034126
AntibodyWBAntibody00001164
Microarray_results (29)
Expression_cluster (186)
Interaction (85)
Anatomy_functionWBbtf0223
Map_infoMapXPosition1.86244Error0.006291
Well_ordered
PositivePositive_cloneF09B9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_data2_point3647
3648
3654
3657
3660
3662
3666
6011
7020
7022
Multi_point1339
1340
1343
1345
1348
1350
1352
1919
2010
2011
2213
2258
2275
2295
2314
2315
2316
3189
3190
3210
3274
3275
3630
3793
3819
3989
4018
4022
4023
4076
4494
Pos_neg_data3650
3665
6695
Reference (76)
MethodGene