WormBase Tree Display for Gene: WBGene00271706

WBGene00271706 SMap: S_parent: Sequence: D2089
  Identity: Version: 1
    Name: Sequence_name: D2089.8
      Molecular_name: D2089.8
        D2089.8.1
        CE52021
      Other_name: CELE_D2089.8 Accession_evidence: NDB BX284602
      Public_name: D2089.8
    DB_info: Database: NDB locus_tag CELE_D2089.8
        Panther gene CAEEL|WormBase=WBGene00271706|UniProtKB=A0A1X7RBQ6
          family PTHR31849
        NCBI gene 32928585
        RefSeq protein NM_001351921.3
        TrEMBL UniProtAcc A0A1X7RBQ6
        UniProt_GCRP UniProtAcc A0A1X7RBQ6
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 Apr 2017 00:49:54 WBPerson1983 Event: Split_from: WBGene00008434
      Split_from: WBGene00008434
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (16)
    RNASeq_FPKM (74)
    Ortholog (23)
    Paralog: WBGene00008434 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is affected by several genes including skn-1; hsf-1; and fbf-1 based on RNA-seq and microarray studies. Is affected by four chemicals including antimycin; Hydrolyzable Tannins; and paraquat based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Cysteine-rich DPF motif domain-containing protein 1; Cysteine-rich domain; and Cysteine-rich domain, DPF-motif. Is an ortholog of human CDPF1 (cysteine rich DPF motif domain containing 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: D2089.8
    Corresponding_transcript: D2089.8.1
    Other_sequence: Tcir_isotig02898
      Oden_contig21712
      Tcir_isotig02897
      TDC01011_1
      CB038236.1
      PPC14763_1
      Acan_isotig01919
      CBC06357_1
  Experimental_info: RNAi_result: WBRNAi00043510 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr2002094
      Expr2020319
    Microarray_results (14)
    Expression_cluster: WBPaper00055862:antimycin_damt-1(gk961032)_regulated
      WBPaper00058725:sftb-1(cer6)_upregulated
      WBPaper00060886:met-2(n4256)_upregulated
      WBPaper00062159:hda-2(ok1479)_downregulated
      WBPaper00062193:hsf-1(RNAi)_upregulated
      WBPaper00062193:skn-1(RNAi)_upregulated
      WBPaper00065841:57_0
      WBPaper00065841:57_1
      WBPaper00066085:sin-3(syb2172)_downregulated
      WBPaper00066110:tetraploid_vs_diploid_downregulated
      WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
      cgc4386_cluster_4_3
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00031832:slr-2_regulated
      WBPaper00035905:FBF-1_Associated
      WBPaper00036130:mir-243_down_regulated
      WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
      WBPaper00040963:TA300_down
      WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_51h
      WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
      WBPaper00045263:0.1mM-paraquat_upregulated
      WBPaper00057098:SiO2-nanoparticles_upregulated
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_E_pi(83_min)
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_MD
      [cgc5767]:expression_class_MDE
      [cgc5767]:expression_class_MD_pd(41_min)
      [cgc5767]:expression_class_ME
  Map_info: Positive: Positive_clone: D2089 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II 3.12322
  Method: Gene