WormBase Tree Display for Gene: WBGene00206502

WBGene00206502 SMap: S_parent: Sequence: T01B7
  Identity: Version: 1
    Name: Sequence_name: T01B7.13
      Molecular_name: T01B7.13
        T01B7.13.1
        CE47984
      Other_name: CELE_T01B7.13 Accession_evidence: NDB BX284602
      Public_name: T01B7.13
    DB_info: Database: WormFlux gene WBGene00206502
        NDB locus_tag CELE_T01B7.13
        NCBI gene 13186216
        RefSeq protein NM_001267254.4
        TrEMBL UniProtAcc G1K0W8
        UniProt_GCRP UniProtAcc G1K0W8
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 Jun 2011 16:44:57 WBPerson1983 Event: Created
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (14)
    RNASeq_FPKM (74)
    Ortholog: WBGene00270977 Caenorhabditis briggsae From_analysis: WormBase-Compara
      Cni-T01B7.13 Caenorhabditis nigoni From_analysis: WormBase-Compara
      FL83_09331 Caenorhabditis latens From_analysis: WormBase-Compara
      Sp34_20314630 Caenorhabditis inopinata From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in hypodermis and intestine based on single-cell RNA-seq and microarray studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray and RNA-seq studies. Is affected by seven chemicals including Tunicamycin; Cry5B; and glycine based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed (2)
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T01B7.13
    Corresponding_transcript: T01B7.13.1
    Other_sequence: RS09204
      GR11008
      CBC08678_1
      GO252733.1
      RSC01740_1
      GR19236
      Tcol_isotig21972
      GR19237
  Experimental_info: RNAi_result: WBRNAi00103495 Inferred_automatically: RNAi_primary
      WBRNAi00062346 Inferred_automatically: RNAi_primary
      WBRNAi00017940 Inferred_automatically: RNAi_primary
      WBRNAi00080136 Inferred_automatically: RNAi_primary
      WBRNAi00027812 Inferred_automatically: RNAi_primary
      WBRNAi00112131 Inferred_automatically: RNAi_primary
      WBRNAi00062347 Inferred_automatically: RNAi_primary
      WBRNAi00052082 Inferred_automatically: RNAi_primary
      WBRNAi00080048 Inferred_automatically: RNAi_primary
      WBRNAi00076625 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1155712
      Expr2005693
      Expr2023909
    Microarray_results: SMD_T01B7.4
      GPL19516_CGZ0032539
      GPL21109_T01B7.13
    Expression_cluster: WBPaper00042194:nhr-114(RNAi)_downregulated
      WBPaper00044786:emr-1(gk119)_upregulated
      WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
      WBPaper00045971:tunicamycin_upregulated_RtcB(null)
      WBPaper00049018:swsn-2.2(RNAi)_downregulated
      WBPaper00050743:elli-1(sam-3)_downregulated
      WBPaper00050801:DAF-12_dauer_regulome
      WBPaper00050801:DAF-16_dauer_regulome
      WBPaper00050801:DPY-21_dauer_regulome
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00051404:alg-1(gk214)_downregulated
      WBPaper00053388:dauer_regulated_Cluster6
      WBPaper00053402:cco-1(RNAi)_downregulated
      WBPaper00055013:hmg-3(bar24)_downregulated
      WBPaper00055013:hmg-4(RNAi)_downregulated
      WBPaper00055013:spt-16(RNAi)_downregulated
      WBPaper00055049:S.gordonii_upregulated
      WBPaper00055354:eat-2(ad1116)_upregulated
      WBPaper00055386:daf-2(e1370)_upregulated
      WBPaper00055386:eat-2(ad465)_upregulated
      WBPaper00055941:atfs-1(et15)_upregulated
      WBPaper00055971:nhl-2(ok818)_25C_downregulated
      WBPaper00056167:Cry5B_downregulated
      WBPaper00056169:rrf-3(pk1426)_downregulated_L3
      WBPaper00056169:rrf-3(pk1426)_downregulated_L4
      WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
      WBPaper00056290:hsp-6(mg585)_upregulated
      WBPaper00056290:mdt-15(mg584)_upregulated
      WBPaper00056330:glycine_downregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
      WBPaper00056471:S.aureus-4h_downregulated_N2
      WBPaper00057068:ints-4(RNAi)_downregulated
      WBPaper00057068:ints-4(RNAi)_downregulated_Cadmium
      WBPaper00057154:HeatShock_upregulated_mRNA
      WBPaper00058948:npr-8(ok1439)_downregulated_PA14
      WBPaper00059117:B.subtilis_upregulated
      WBPaper00059231:alh-6(lax105)_L4_upregulated
      WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
      WBPaper00060014:set-2(tm1630)_downregulated
      WBPaper00060273:isp-1(qm150)_upregulated
      WBPaper00060273:vrk-1(RNAi)_downregulated
      WBPaper00060445:ikb-1(nr2027)_downregulated_L4
      WBPaper00060445:nfki-1(cer1)_downregulated_L4
      WBPaper00060683:hlh-11(ko1)_upregulated
      WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00061007:S.aquatilis_upregulated
      WBPaper00061081:E.faecalis_upregulated_N2
      WBPaper00061340:Hypodermis
      WBPaper00061424:Diet_MYb120_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
      WBPaper00061613:human-alpha-Synuclein(A53T)_upregulated
      WBPaper00061902:camt-1(ok515)_regulated_AFD
      WBPaper00062156:jmjd-1.2(zr1010)_upregulated
      WBPaper00062156:jmjd-5(zr1234)_upregulated
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062345:bortezomib_4h_upregulated_N2
      WBPaper00062345:bortezomib_4h_upregulated_zip-1(jy13)
      WBPaper00062347:blmp-1(tm548)_downregulated
      WBPaper00062446:nhr-8(hd117)_upregulated
      WBPaper00062456:doxycycline_upregulated_N2_transcript
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064306:Agaro-oligosaccharides_upregulated
      WBPaper00064532:pals-25(icb98)_downregulated
      WBPaper00064539:nhr-114(gk849)_downregulated
      WBPaper00064716:paraquat_upregulated
      WBPaper00065581:hpk-1(pk1393)_upregulated
      WBPaper00065746:eat-2(ad1113)_downregulated
      WBPaper00065841:82_0
      WBPaper00065984:pals-17(syb3980)_downregulated
      WBPaper00066093:E.coli-purE_upregulated
      WBPaper00066110:Cisplatin_upregulated_tetraploid
      WBPaper00066110:Doxorubicin_upregulated_diploid
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      cgc4489_group_2
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00056330:mrps-5(RNAi)_upregulated
      [cgc6390]:oogenesis-enriched
  Map_info: Positive: Positive_clone: T01B7 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II 0.862688
  Method: Gene