WormBase Tree Display for Gene: WBGene00044238

WBGene00044238 SMap: S_parent: Sequence: C30H6
  Identity: Version: 1
    Name: Sequence_name: C30H6.12
      Molecular_name: C30H6.12a
        C30H6.12a.1
        CE47461
        C30H6.12b
        CE41361
        C30H6.12b.1
      Other_name: CELE_C30H6.12 Accession_evidence: NDB BX284604
      Public_name: C30H6.12
    DB_info: Database: AceView gene C30H6.12
        WormFlux gene WBGene00044238
        NDB locus_tag CELE_C30H6.12
        NCBI gene 3565196
        RefSeq protein NM_001269023.4
            NM_001269022.3
        TrEMBL UniProtAcc H9G2Z6
            H9G2Z7
        UniProt_GCRP UniProtAcc H9G2Z6
    Species: Caenorhabditis elegans
    History: Version_change: 1 14 Mar 2005 11:02:20 WBPerson1846 Event: Created
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (162)
    RNASeq_FPKM (74)
    Ortholog (14)
    Paralog: WBGene00016177 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00022008 Caenorhabditis elegans From_analysis: TreeFam
    Structured_description: Automated_description: Enriched in body wall muscle cell; intestine; and neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including skn-1; hsf-1; and eat-2 based on RNA-seq and microarray studies. Is affected by eleven chemicals including multi-walled carbon nanotube; Cadmium Chloride; and metformin based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info (4)
  Experimental_info: RNAi_result: WBRNAi00041581 Inferred_automatically: RNAi_primary
      WBRNAi00011411 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1014157
      Expr1145598
      Expr2001266
      Expr2019488
    Drives_construct: WBCnstr00023684
    Construct_product: WBCnstr00023684
    Microarray_results (17)
    Expression_cluster: WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:bodywall-muscle_larva_enriched
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:dopaminergic-neurons_larva_enriched
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
      WBPaper00042477:prp-8(RNAi)_upregulated_RNAseq
      WBPaper00042561:smgl-1(RNAi)_upregulated
      WBPaper00046497:B.thuringiensis_0.5mix_upregulated_12h
      WBPaper00048988:neuron_expressed
      WBPaper00049377:MWCNT_downregulated
      WBPaper00049942:hsf-1(RNAi)_upregulated
      WBPaper00050096:P.aeruginosa_upregulated
      WBPaper00050370:dpy-21(e428)_L3_downregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050504:hrp-2(RNAi)_upregulated
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00051558:aging_regulated
      WBPaper00052856:Cadmium_regulated
      WBPaper00053318:mir-71(n4115)_upregulated_mRNA
      WBPaper00053606:elt-2(ca15)_vs_elt-2(ca15);elt-7(tm840)_upregulated
      WBPaper00054758:alg-1(gk204)_upregulated
      WBPaper00055013:spt-16(RNAi)_upregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Rapamycin-Metformin_downregulated
      WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
      WBPaper00055354:Rapamycin-Rifampicin_downregulated
      WBPaper00055354:Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rifampicin-Psora_downregulated
      WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated
      WBPaper00056161:male_enriched_siRNA
      WBPaper00056443:sek-1(km4)_upregulated
      WBPaper00056809:smn-1(ok355)_upregulated
      WBPaper00057068:Cadmium_upregulated
      WBPaper00057068:ints-4(RNAi)_upregulated
      WBPaper00057265:metaformin_downregulated_OP50
      WBPaper00057265:metaformin_downregulated_OP50-MR
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00058725:sftb-1(cer6)_upregulated
      WBPaper00058725:sftb-1(cer39)_upregulated
      WBPaper00058948:PA14_downregulated
      WBPaper00059117:B.subtilis_downregulated
      WBPaper00059253:stearic-acid_upregulated
      WBPaper00059334:sacy-1(depletion)_regulated
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00059739:hira-1(gk835598)_downregulated_L1
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
      WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00060921:cat-2(e1112)_downregulated
      WBPaper00060921:tdc-1(n3419)_downregulated
      WBPaper00061081:E.faecalis_upregulated_N2
      WBPaper00061340:ADL
      WBPaper00061340:ASG
      WBPaper00061340:ASH
      WBPaper00061340:ASI
      WBPaper00061340:ASJ
      WBPaper00061340:ASK
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061424:Diet_MYb120_upregulated
      WBPaper00061530:nhr-49(e2144)_upregulated
      WBPaper00061651:ASI_enriched
      WBPaper00061651:ASK_enriched
      WBPaper00061651:PHB_enriched
      WBPaper00061753:csr-1(tor159)_upregulated_25C
      WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR
      WBPaper00062056:lin-35(n745)_upregulated
      WBPaper00062103:neuron_enriched
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062193:skn-1(RNAi)_upregulated
      WBPaper00062325:muscle_enriched_coding-RNA
      WBPaper00062345:bortezomib_4h_upregulated_N2
      WBPaper00062345:bortezomib_4h_upregulated_zip-1(jy13)
      WBPaper00062585:hlh-26(ok1453)_downregulated_E.faecium
      WBPaper00064130:Beta-Amyloid_24h_upregulated_mRNA
      WBPaper00064532:pals-22(jy3)_upregulated
      WBPaper00064539:nhr-114(gk849)_upregulated
      WBPaper00064661:lpd-3(ok2138)_upregulated
      WBPaper00064769:him-17(me24)_upregulated
      WBPaper00064939:vit-5(RNAi)_upregulated
      WBPaper00065029:cadmium_upregulated
      WBPaper00065086:JU1400_N.ferruginous_regulated
      WBPaper00065086:JU1400_N.ironsii_regulated
      WBPaper00065096:Day10_vs_Day1_upregulated
      WBPaper00065258:anchor-cell_enriched
      WBPaper00065749:Heat-Shock-With-Recovery_upregulated_N2
      WBPaper00065841:47_0
      WBPaper00065841:63_0
      WBPaper00065841:77_0
      WBPaper00065841:99_0
      WBPaper00065984:pals-17(syb3980)_upregulated
      WBPaper00066204:CdCl2_upregulated_mRNA
      WBPaper00066232:hsf-1(RNAi)_upregulated_ash-2
      WBPaper00066232:hsf-1(RNAi)_upregulated_WT
      cgc4489_group_11
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00041207:CE_dauer_up
      WBPaper00055899:nitroguanidine_regulated
      WBPaper00056330:mrps-5(RNAi)_upregulated
  Map_info: Positive: Positive_clone: C30H6 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV 16.625
  Method: Gene