WormBase Tree Display for Gene: WBGene00044147

WBGene00044147 SMap: S_parent: Sequence: M163
  Identity: Version: 1
    Name (4)
    DB_info: Database: AceView gene XP95
        WormFlux gene WBGene00044147
        NDB locus_tag CELE_M163.11
        Panther gene CAEEL|WormBase=WBGene00044147|UniProtKB=Q564X4
          family PTHR21724
        NCBI gene 3565858
        RefSeq protein NM_001029639.4
        TREEFAM TREEFAM_ID TF318899
        TrEMBL UniProtAcc Q564X4
        UniProt_GCRP UniProtAcc Q564X4
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Mar 2005 14:33:10 WBPerson1846 Event: Created
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (19)
    Strain: WBStrain00037812
    RNASeq_FPKM (74)
    Ortholog (59)
    Paralog (61)
    Structured_description: Automated_description: Enriched in ABplppaaaap; ABprppaaaap; and nerve ring neurons based on single-cell RNA-seq studies. Is affected by several genes including eat-2; elt-2; and pgl-1 based on RNA-seq studies. Is affected by four chemicals including Psoralens; allantoin; and Rifampin based on RNA-seq studies. Is predicted to encode a protein with the following domains: ShK domain-like and ShKT domain. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: M163.11
    Corresponding_CDS_history: M163.11:wp236
    Corresponding_transcript: M163.11.1
    Other_sequence: CJC03745_1
      GE638724.1
    Associated_feature: WBsf718772
      WBsf982280
      WBsf1007917
      WBsf1024404
  Experimental_info: Expr_pattern: Expr1018642
      Expr1040189
      Expr1154693
      Expr2005253
      Expr2023472
    Drives_construct: WBCnstr00023731
    Construct_product: WBCnstr00023731
    Microarray_results: A_12_P131350
      A_12_P131351
      GPL14144_M163.11_610-669_0.946_1_A
      GPL19516_CGZ0030179
      GPL21109_M163.11
      GPL8304_CE_WBGene00044147_A
      GPL8673_M163_11P00002
      GPL8673_M163_11P00057
      GPL8673_M163_11P00443
    Expression_cluster: WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
      WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
      WBPaper00050163:chd-3(eh4);let-418(RNAi)_upregulated_100-cell-embryo
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00053606:elt-2(ca15)_vs_elt-2(ca15);elt-7(tm840)_upregulated
      WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_upregulated
      WBPaper00053888:drh-3(rrr2)_upregulated
      WBPaper00055013:spt-16(RNAi)_upregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Psora-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
      WBPaper00055354:Rapamycin_downregulated
      WBPaper00055354:Rifampicin_upregulated
      WBPaper00059191:hsp-16.2p-LIN-29_upregulated
      WBPaper00060014:set-2(tm1630)_upregulated
      WBPaper00061340:RIB
      WBPaper00061340:RIC_parent
      WBPaper00061340:SIA
      WBPaper00061340:SIB
      WBPaper00061390:daf-22(ok693)_ascarosides_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062520:qui-1(db104)_downregulated
      WBPaper00065096:Day10_vs_Day1_upregulated
      WBPaper00065096:npr-8(ok1439)_downregulated_Day10_25C
      WBPaper00065841:13_0
  Map_info: Positive: Positive_clone: M163 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: X 16.7083
  Method: Gene