WormBase Tree Display for Gene: WBGene00022864

WBGene00022864 SMap: S_parent: Sequence: ZK1236
  Identity: Version: 1
    Name: Sequence_name: ZK1236.5
      Molecular_name: ZK1236.5
        ZK1236.5.1
        CE38925
      Other_name: CELE_ZK1236.5 Accession_evidence: NDB BX284603
      Public_name: ZK1236.5
    DB_info: Database: AceView gene 3J518
        WormQTL gene WBGene00022864
        WormFlux gene WBGene00022864
        NDB locus_tag CELE_ZK1236.5
        NCBI gene 191537
        RefSeq protein NM_001038298.4
        SwissProt UniProtAcc P34621
        TREEFAM TREEFAM_ID TF318167
        UniProt_GCRP UniProtAcc P34621
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:06 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (4)
    RNASeq_FPKM (74)
    Ortholog (30)
    Paralog: WBGene00044588 Caenorhabditis elegans From_analysis: TreeFam
    Structured_description: Concise_description: ZK1236.5 encodes a protein with no obvious non-nematode homologs; eitherZK1236.9, or ZK1236.5, or both proteins weakly inhibit DHC-1 in vivo;likewise, either ZK1236.5, or ZK1236.9, or both proteins are required inmass RNAi assays for normal osmoregulation and normally rapid growth. Paper_evidence: WBPaper00005654
            WBPaper00006395
            WBPaper00030897
          Curator_confirmed: WBPerson567
          Date_last_updated: 26 Aug 2007 00:00:00
      Automated_description: Enriched in NSM; germ line; and intestine based on RNA-seq and microarray studies. Is affected by several genes including hsf-1; let-7; and gld-1 based on proteomic; RNA-seq; and microarray studies. Is affected by seven chemicals including rotenone; Rifampin; and allantoin based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: ZK1236.5
    Corresponding_CDS_history: ZK1236.5:wp131
      ZK1236.5a:wp143
      ZK1236.5b:wp133
    Corresponding_transcript: ZK1236.5.1
    Other_sequence (20)
    Associated_feature: WBsf651272
      WBsf227135
  Experimental_info: RNAi_result: WBRNAi00005938 Inferred_automatically: RNAi_primary
      WBRNAi00009457 Inferred_automatically: RNAi_primary
      WBRNAi00027042 Inferred_automatically: RNAi_primary
      WBRNAi00059167 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1021661
      Expr1040116
      Expr1162586
      Expr2008727
      Expr2026962
    Drives_construct: WBCnstr00023911
    Construct_product: WBCnstr00023911
    Microarray_results (17)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00032528:L3_enriched
      WBPaper00035073:mitochondria_protein
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
      WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044501:gld-1_let-7_regulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045521:Gender_Neutral
      WBPaper00045571:germline-ablation_downregulated
      WBPaper00045974:NSM_enriched_totalRNA_RNAseq
      WBPaper00046509:htz-1(ok3099)_downregulated
      WBPaper00048988:neuron_expressed
      WBPaper00049545:jmjd-3.1(+)_downregulated
      WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
      WBPaper00049942:hsf-1(RNAi)_downregulated
      WBPaper00050234:lin-28(RNAi)_upregulated
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:downregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050859:downregulated_pgl-1(ct131)_vs_control_day1-adult
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:seam_expressed
      WBPaper00051039:germline_enriched
      WBPaper00052884:emb-4(hc60)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053321:nos-1(gv5)nos-2(RNAi)_downregulated_fed-L1_Truseq
      WBPaper00053388:dauer_regulated_Cluster1
      WBPaper00053810:sod-2(ok1030)_upregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055482:pmt-2(RNAi)_downregulated
      WBPaper00055648:germline_expressed
      WBPaper00055971:nhl-2(ok818)_25C_downregulated
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056809:smn-1(ok355)_downregulated
      WBPaper00057288:iff-1(RNAi)_downregulated_transcript
      WBPaper00058691:sin-3(tm1276)_downregulated
      WBPaper00060100:SiNP_downregulated_mRNA
      WBPaper00061341:28C_24h_downregulated
      WBPaper00061341:28C_48h_downregulated
      WBPaper00064071:NHR-49_interacting
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064716:paraquat_upregulated
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
      cgc4489_group_4
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00031003:hlh_1_enriched
      WBPaper00032165:differentially_expressed_with_age_medoid_5
      WBPaper00034739:N2moreDR1350
      WBPaper00036286:Pattern_G
      WBPaper00038231:Cry5B_1.5-fold_downregulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00048637:lin-35(n745)_starvation_downregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
      WBPaper00048989:N2_allantoin_upregulated
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_E_pi(122_min)
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_MD
      [cgc5767]:expression_class_MDE
      [cgc5767]:expression_class_MD_pd(23_min)
      [cgc5767]:expression_class_ME
      [cgc6390]:mixed_oogenesis-somatic
    Interaction: WBInteraction000008240
      WBInteraction000008241
      WBInteraction000576369
  Map_info: Positive: Positive_clone: ZK1236 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III -0.261509
  Method: Gene