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WormBase Tree Display for Gene: WBGene00021183

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Name Class

WBGene00021183SMapS_parentSequenceY9C9A
IdentityVersion1
NameSequence_nameY9C9A.16
Molecular_nameY9C9A.16a
Y9C9A.16a.1
CE39879
Y9C9A.16b
CE47751
Y9C9A.16b.1
Other_nameCELE_Y9C9A.16Accession_evidenceNDBBX284604
Public_nameY9C9A.16
DB_infoDatabaseAceViewgene4F728
WormQTLgeneWBGene00021183
WormFluxgeneWBGene00021183
NDBlocus_tagCELE_Y9C9A.16
PanthergeneCAEEL|WormBase=WBGene00021183|UniProtKB=J7SF87
familyPTHR10632
NCBIgene189421
RefSeqproteinNM_068287.5
NM_001276820.3
TrEMBLUniProtAccJ7SF87
Q9N2S1
UniProt_GCRPUniProtAccJ7SF87
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:04WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (40)
StrainWBStrain00033160
RNASeq_FPKM (74)
GO_annotation00024019
00024020
00024021
00024022
Ortholog (38)
ParalogWBGene00008538Caenorhabditis elegansFrom_analysis (4)
Structured_descriptionAutomated_descriptionPredicted to enable FAD binding activity and sulfide:quinone oxidoreductase activity. Predicted to be involved in sulfide oxidation, using sulfide:quinone oxidoreductase. Predicted to be located in mitochondrion. Is an ortholog of human SQOR (sulfide quinone oxidoreductase).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY9C9A.16a
Y9C9A.16b
Corresponding_CDS_historyY9C9A.16:wp154
Corresponding_transcriptY9C9A.16a.1
Y9C9A.16b.1
Other_sequence (11)
Experimental_infoRNAi_result (3)
Expr_patternExpr1014783
Expr1162123
Expr2008535
Expr2026773
Drives_constructWBCnstr00024642
Construct_productWBCnstr00024642
Microarray_results (22)
Expression_clusterWBPaper00031040:TGF-beta_adult_upregulated
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:dopaminergic-neurons_larva_enriched
WBPaper00037950:dopaminergic-neurons_larva_SelectivelyEnriched
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:hypodermis_larva_enriched
WBPaper00037950:hypodermis_larva_SelectivelyEnriched
WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_downregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
WBPaper00041954:ethanol_upregulated
WBPaper00042194:nhr-114(RNAi)_downregulated
WBPaper00044426:rotenone_24h_downregulated
WBPaper00044638:daf-2(e1370)rsks-1(ok1255)_regulated
WBPaper00045316:prg-1_upregulated_L4
WBPaper00045401:N.parisii_64h_downregulated
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045571:germline-ablation_upregulated
WBPaper00045618:fbf-1_upregulated
WBPaper00045774:clk-1_upregulated
WBPaper00045861:wdr-5(ok1417)_upregulated
WBPaper00045934:wrn-1(gk99)_downregulated
WBPaper00046337:polysomal_daf-2_vs_daf-2;daf-16_downregulated
WBPaper00046337:polysomal_N2_vs_daf-2_downregulated
WBPaper00047131:daf-2(e1370)_upregulated_hel-1(gk148684)-background
WBPaper00047131:daf-2(e1370)_upregulated_N2-background
WBPaper00047132:glp-1(ts)-25C_upregulated
WBPaper00048923:Aging_regulated
WBPaper00048988:neuron_expressed
WBPaper00049368:daf-2(e1370)_upregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
WBPaper00049732:blmp-1(tm548);daf-7(e1372ts)_vs_daf-7(e1372ts)_downregulated
WBPaper00049736:daf-2(e1370)_upregulated_15deg-then-25deg(12hr)
WBPaper00049942:HeatShock_upregulated_hsf-1(RNAi)
WBPaper00049942:hsf-1(RNAi)_upregulated
WBPaper00050096:P.aeruginosa_downregulated
WBPaper00050344:PLM-neuron_enriched
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050801:DPY-21_dauer_regulome
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050990:intestine_expressed
WBPaper00050990:seam_expressed
WBPaper00053154:human-amyloid-beta_tau_regulated
WBPaper00053295:lin-22(ot269)_upregulated
WBPaper00053318:Aging_upregulated_mRNA_N2
WBPaper00053388:dauer_regulated_Cluster4
WBPaper00053402:cco-1(RNAi)_upregulated
WBPaper00053771:up_at_24h-NaCl
WBPaper00053771:up_at_dpy-7(e88)
WBPaper00053810:clk-1(qm30)_upregulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:isp-1(qm150)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00053888:drh-3(rrr2)_upregulated
WBPaper00055013:hmg-3(bar24)_upregulated
WBPaper00055013:hmg-4(RNAi)_upregulated
WBPaper00055013:spt-16(RNAi)_upregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
WBPaper00055354:Rapamycin-Rifampicin_upregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055354:Rifampicin-Psora_upregulated
WBPaper00055386:daf-2(e1370)_upregulated
WBPaper00055386:eat-2(ad465)_downregulated
WBPaper00055827:daf-2(e1370)_upregulated
WBPaper00055827:pfd-6(gk493446)_upregulated
WBPaper00055941:atfs-1(et15)_upregulated
WBPaper00055941:nuo-6(qm200)_upregulated
WBPaper00056326:zip-3(gk3164)_upregulated_P.aeruginosa-infected
WBPaper00056443:DietaryRestriction_downregulated
WBPaper00056443:sek-1(km4)_downregulated
WBPaper00056471:flcn-1(ok975)_upregulated
WBPaper00058969:RIS_depleted
WBPaper00059194:klf-1(RNAi)_regulated
WBPaper00059253:sucrose_stearic-acid_upregulated
WBPaper00059253:sucrose_upregulated
WBPaper00059426:Ag-nanoparticles_upregulated
WBPaper00059735:glucose_upregulated_N2
WBPaper00059987:Wounding_upregulated
WBPaper00060014:set-2(tm1630)_downregulated
WBPaper00060434:pH4.33_vs_pH6.33_uprgulated
WBPaper00060445:ikb-1(nr2027)_downregulated_L4
WBPaper00060459:bcat-1(RNAi)_upregulated
WBPaper00060661:sensory-neuron_enriched
WBPaper00060764:swsn-1(os22ts)_upregulated
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00060886:spr-5(by101);met-2(n4256)_downregulated
WBPaper00061274:hypergravity_15xg_downregulated
WBPaper00061340:Z1_Z4
WBPaper00061341:28C_24h_upregulated
WBPaper00061341:28C_48h_upregulated
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061424:Diet_MYb131_upregulated
WBPaper00061439:unc-30(ok613)_upregulated
WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
WBPaper00061527:ugt-27-C28G1.2
WBPaper00061530:nhr-49(e2144)_downregulated
WBPaper00061590:CGP37157_downregulated
WBPaper00061613:human-amyloid-beta_upregulated
WBPaper00061651:BDU_enriched
WBPaper00061699:daf-18(ok480)_downregulated
WBPaper00061952:daf-18(nr2037)_downregulated
WBPaper00061952:daf-18(yh1)_downregulated
WBPaper00062103:neuron_enriched
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062497:xpf-1(tm2842)_downregulated
WBPaper00062585:hlh-26(ok1453)_downregulated_E.faecium
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064158:xpo-1(RNAi)_upregulated
WBPaper00064539:nhr-114(gk849)_upregulated
WBPaper00064632:daf-2(e1370)_upregulated_intestine
WBPaper00064727:daf-2(e1370)_upregulated
WBPaper00064769:him-17(me24)_upregulated
WBPaper00065005:sams-3(RNAi)_upregulated
WBPaper00065005:sams-4(RNAi)_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065096:npr-8(ok1439)_upregulated_Day10_20C
WBPaper00065315:mating_downregulated_Day2-7
WBPaper00065841:12_0
WBPaper00065841:80_0
WBPaper00065841:112_0
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066005:RAGA-1_degradation_neuronal_upregulated
WBPaper00066110:Doxorubicin_downregulated_diploid
WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
cgc4489_group_17
WBPaper00024393:strongly_regulated_dauer_genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00028789:PA14_vs_OP50_downregulated_8hr
WBPaper00029437:dcr-1_upregulated
WBPaper00035873:osm-7_regulated
WBPaper00036130:mir-243_up_regulated
WBPaper00036286:Pattern_D
WBPaper00037113:Chlorpyrifos_Diazinon_16C_regulated
WBPaper00038462:aging_downregulated
WBPaper00040184:hcf-1up_sir-2.1up_daf-2up
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00042128:gei-8(ok1671)_upregulated
WBPaper00045673:colistin_upregulated
WBPaper00055899:nitroguanidine_regulated
InteractionWBInteraction000519850
WBInteraction000567730
Map_infoPositivePositive_cloneY9C9AInferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV1.39433
ReferenceWBPaper00038491
WBPaper00042128
WBPaper00055090
MethodGene