WormBase Tree Display for Gene: WBGene00021120

WBGene00021120 SMap: S_parent: Sequence: W09G12
  Identity: Version: 1
    Name: Sequence_name: W09G12.6
      Molecular_name (3)
      Other_name: CELE_W09G12.6 Accession_evidence: NDB BX284604
      Public_name: W09G12.6
    DB_info: Database: AceView gene 4B985
        WormQTL gene WBGene00021120
        WormFlux gene WBGene00021120
        NDB locus_tag CELE_W09G12.6
        NCBI gene 176942
        RefSeq protein NM_067657.3
        TrEMBL UniProtAcc O45197
        UniProt_GCRP UniProtAcc O45197
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:04 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (34)
    RNASeq_FPKM (74)
    Ortholog: WBGene00038278 Caenorhabditis briggsae From_analysis: OMA
      WBGene00079700 Caenorhabditis remanei From_analysis: OMA
      WBGene00157267 Caenorhabditis brenneri From_analysis: OMA
      chrIV_pilon.g9644 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in intestine; sensory neurons; and in male based on RNA-seq and microarray studies. Is affected by several genes including rrf-3; eat-2; and dcr-1 based on tiling array; microarray; and RNA-seq studies. Is affected by six chemicals including Zidovudine; allantoin; and Sirolimus based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: W09G12.6
    Corresponding_transcript: W09G12.6.1
    Other_sequence: PPC00423_1
      AS15660
    Associated_feature: WBsf227925
  Experimental_info: RNAi_result: WBRNAi00019763 Inferred_automatically: RNAi_primary
      WBRNAi00055059 Inferred_automatically: RNAi_primary
      WBRNAi00007268 Inferred_automatically: RNAi_primary
      WBRNAi00036415 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1020844
      Expr1039212
      Expr1158596
      Expr2006892
      Expr2025119
    Microarray_results (15)
    Expression_cluster: WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00038438:P.lumniescens_24hr_downregulated_RNAseq
      WBPaper00042477:rsr-2(RNAi)_downregulated_TilingArray
      WBPaper00050231:male_enriched
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_25C
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053888:drh-3(rrr2)_downregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Rapamycin-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Metformin_upregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055648:male-tail_expressed
      WBPaper00055971:nhl-2(ok818)_25C_downregulated
      WBPaper00056169:rrf-3(pk1426)_upregulated_adult
      WBPaper00056169:rrf-3(pk1426)_upregulated_L4
      WBPaper00059490:dcr-1(m9375)_upregulated
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060445:ikb-1(nr2027)_downregulated_L1
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00061527:176662_at-Y53F4B.16
      WBPaper00061753:csr-1(tor159)_downregulated_25C
      WBPaper00065225:nhr-42(tm1375)_upregulated_uninfected
      cgc4489_group_15
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00026980:intestine_enriched
      WBPaper00027111:rrf-2(ok210)_upregulated
      WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
      WBPaper00040858:eQTL_age_regulated_developing
      WBPaper00040858:eQTL_regulated_developing
      WBPaper00046853:AOBr_M.aeruginosa-batch-culture_downregulated
      WBPaper00048989:N2_rapamycin_upregulated
    Interaction: WBInteraction000208842
      WBInteraction000548545
  Map_info: Positive: Positive_clone: W09G12 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV -21.0292
  Method: Gene