WormBase Tree Display for Gene: WBGene00020118

WBGene00020118 SMap: S_parent: Sequence: R155
  Identity: Version: 2
    Name: Sequence_name: R155.4
      Molecular_name: R155.4
      Other_name: CELE_R155.4 Accession_evidence: NDB BX284603
      Public_name: R155.4
    DB_info: Database: AceView gene 3D69
        WormQTL gene WBGene00020118
        WormFlux gene WBGene00020118
        NDB locus_tag CELE_R155.4
        NCBI gene 187910
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:02 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 20 Jan 2020 12:19:48 WBPerson4025 Event: Changed_class: CDS Pseudogene
    Status: Live
  Gene_info: Biotype: SO:0000336
    Allele (77)
    RNASeq_FPKM (74)
    Ortholog (19)
    Paralog (32)
    Structured_description: Automated_description: Enriched in germ line based on RNA-seq studies. Is affected by several genes including daf-2; eat-2; and npr-1 based on microarray and RNA-seq studies. Is affected by eight chemicals including methylmercuric chloride; antimycin; and glycine based on microarray and RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS_history: R155.4:wp275
    Corresponding_pseudogene: R155.4
    Associated_feature: WBsf991431
  Experimental_info: Expr_pattern: Expr1013852
      Expr1038753
      Expr1155630
      Expr2005661
      Expr2023877
    Microarray_results (14)
    Expression_cluster: WBPaper00032479:CB4856vsN2_LifeStageProfile_Variation
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
      WBPaper00042561:smg-2(RNAi)_upregulated
      WBPaper00044037:eat-2_regulated_nhr-62_dependent
      WBPaper00044037:eat-2_upregulated
      WBPaper00044316:CH3HgCl_7.5uM_upregulated
      WBPaper00044656:tatn-1(qd182)_upregulated
      WBPaper00044760:germline_specific
      WBPaper00045050:csr-1(hypomorph)_upregulated
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00045521:Spermatogenic
      WBPaper00045571:germline-ablation_downregulated
      WBPaper00045618:fbf-1_upregulated
      WBPaper00049498:npr-1(ur89)_regulated_1
      WBPaper00049545:jmjd-3.1(+)_downregulated
      WBPaper00050193:met-2(n4256)set-25(n5021)_upregulated_L1
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
      WBPaper00053318:Aging_downregulated_mRNA_N2
      WBPaper00053318:mir-71(n4115)_downregulated_mRNA
      WBPaper00053599:female_vs_male_downregulated
      WBPaper00053810:daf-2(e1370)_upregulated
      WBPaper00054493:hpl-2(tm1489)_upregulated
      WBPaper00055013:hmg-3(bar24)_downregulated
      WBPaper00055226:adr-1(tm668)_downregulated
      WBPaper00055862:antimycin_damt-1(gk961032)_regulated
      WBPaper00055941:atfs-1(et15)_upregulated
      WBPaper00056161:male_enriched_siRNA
      WBPaper00056330:glycine_downregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00056868:P.aeruginosa_upregulated_smallRNA
      WBPaper00057068:ints-4(RNAi)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:sin-3(tm1276)_upregulated
      WBPaper00058691:cfp-1(tm6369)_upregulated
      WBPaper00058691:sin-3(tm1276)_upregulated
      WBPaper00059117:B.subtilis_upregulated
      WBPaper00059191:hsp-16.2p-LIN-29_upregulated
      WBPaper00061203:sin-3(tm1276)_downregulated
      WBPaper00061203:spr-1(ok2144)_downregulated
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061424:Diet_MYb120_upregulated
      WBPaper00061439:unc-30(ok613)_downregulated
      WBPaper00061479:ubc-9(ne4833)_upregulated
      WBPaper00061527:C04E6.4-Y47H9B.2_10282
      WBPaper00061613:human-amyloid-beta_alpha-Synuclein(A53T)_upregulated
      WBPaper00061613:human-amyloid-beta_upregulated
      WBPaper00062056:met-2(n4256)_upregulated
      WBPaper00062156:jmjd-5(zr1234)_upregulated
      WBPaper00062446:nhr-8(hd117)_upregulated
      WBPaper00062456:doxycycline_upregulated_CB4856_transcript
      WBPaper00062456:doxycycline_upregulated_N2_transcript
      WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064509:static-magnetic-field_upregulated
      WBPaper00064716:paraquat_downregulated
      WBPaper00065086:JU1400_N.ferruginous_regulated
      WBPaper00065086:N2_N.ausubeli_regulated
      WBPaper00065096:25C_vs_20C_downregulated
      WBPaper00065984:pals-17(syb3980)_upregulated
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      WBPaper00026929:Resveratrol_regulated_daf-16
      WBPaper00036123:Cadmium_regulated
      WBPaper00036286:Pattern_H
      WBPaper00040858:eQTL_age_regulated_aging
      WBPaper00040858:eQTL_regulated_old
      WBPaper00048989:N2_rapamycin_upregulated
    Interaction (11)
  Map_info: Positive: Positive_clone: R155 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III -15.6958
  Method: Gene