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WormBase Tree Display for Gene: WBGene00019203

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Name Class

WBGene00019203SMapS_parentSequenceH14N18
IdentityVersion2
NameCGC_namettr-47
Sequence_nameH14N18.3
Molecular_nameH14N18.3
H14N18.3.1
CE17975
Other_nameCELE_H14N18.3Accession_evidenceNDBBX284605
Public_namettr-47
DB_infoDatabaseAceViewgene5J403
WormQTLgeneWBGene00019203
WormFluxgeneWBGene00019203
NDBlocus_tagCELE_H14N18.3
PanthergeneCAEEL|WormBase=WBGene00019203|UniProtKB=O61977
familyPTHR21700
NCBIgene179270
RefSeqproteinNM_001380717.2
TREEFAMTREEFAM_IDTF315773
TrEMBLUniProtAccO61977
UniProt_GCRPUniProtAccO61977
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:01WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
220 Sep 2007 11:48:01WBPerson2970Name_changeCGC_namettr-47
StatusLive
Gene_info (8)
Molecular_infoCorresponding_CDSH14N18.3
Corresponding_transcriptH14N18.3.1
Other_sequence (17)
Associated_featureWBsf647028
WBsf647029
WBsf718364
WBsf1000789
WBsf1020119
WBsf232175
Experimental_infoRNAi_resultWBRNAi00016272Inferred_automaticallyRNAi_primary
WBRNAi00078376Inferred_automaticallyRNAi_primary
WBRNAi00103418Inferred_automaticallyRNAi_primary
WBRNAi00033716Inferred_automaticallyRNAi_primary
WBRNAi00049409Inferred_automaticallyRNAi_primary
Expr_patternExpr1022957
Expr1038291
Expr1153144
Expr2017614
Expr2035752
Drives_constructWBCnstr00025993
Construct_productWBCnstr00025993
Microarray_results (18)
Expression_clusterWBPaper00031040:Cluster_5
WBPaper00032528:L3_enriched
WBPaper00033065:cyc-1(RNAi)_downregulated
WBPaper00037055:DAF-16_binding_DNA
WBPaper00037682:sma-2_downregulated
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:germline-precursors_embryo_enriched
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038289:oocyte_protein
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044501:gld-1_let-7_regulated
WBPaper00044736:flat_dev_expression
WBPaper00044746:aging_upregulated_HeatShock
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00045417:128Q-huntingtin_upreglated
WBPaper00045521:Spermatogenic
WBPaper00045571:germline-ablation_upregulated
WBPaper00045934:wrn-1(gk99)_downregulated
WBPaper00046012:tdp-1(ok803)_upregulated
WBPaper00046337:monosomal_N2_vs_daf-2_downregulated
WBPaper00046337:polysomal_daf-2_vs_daf-2;daf-16_downregulated
WBPaper00046337:polysomal_N2_vs_daf-2_downregulated
WBPaper00047131:daf-2(e1370)_upregulated_N2-background
WBPaper00047132:glp-1(ts)-25C_upregulated
WBPaper00048785:heat-shock_downregulated
WBPaper00048988:neuron_expressed
WBPaper00049942:HeatShock_downregulated_hsf-1(RNAi)
WBPaper00049942:hsf-1(RNAi)_downregulated
WBPaper00050053:muscle_enriched_Day4
WBPaper00050053:muscle_enriched_Day12
WBPaper00050080:rbr-2(tm3141)_upregulated
WBPaper00050163:chd-3(eh4)_downregulated_24-cell-embryo
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050801:DPY-21_dauer_regulome
WBPaper00050859:upregulated_glh-1(gk100)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:body-muscle_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:seam_expressed
WBPaper00051555:atm-1(gk186)_regulated_protein
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053295:lin-22(ot269)_downregulated
WBPaper00053388:dauer_regulated_Cluster4
WBPaper00053599:mitosis_vs_meiosis_downregulated
WBPaper00053599:oocyte_vs_mitosis_downregulated
WBPaper00053713:Pheromone-induced_postdauer_vs_control_downregulated
WBPaper00053713:Starvation-induced_postdauer_vs_control_upregulated
WBPaper00053810:clk-1(qm30)_upregulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:isp-1(qm150)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00053814:15C_downregulated_PY79
WBPaper00055103:thoc-5(wy822)_downregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Psora_downregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055354:Rifampicin-Psora_downregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00056139:soil-microbiota_downregulated
WBPaper00056161:male_enriched_siRNA
WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
WBPaper00056443:DietaryRestriction_downregulated
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057288:Cold_downregulated_protein
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00058942:henn-1(pk2295)_upregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059739:hira-1(gk835598)_downregulated_adult
WBPaper00059824:rnp-6(dh1127)_regulated_OP50
WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
WBPaper00060100:SiNP_downregulated_mRNA
WBPaper00060634:unc-120(st364)_downregulated
WBPaper00060661:sensory-neuron_depleted
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061340:Z1_Z4
WBPaper00061341:28C_24h_upregulated
WBPaper00061527:W01F3.2_1554-Y106G6D.8
WBPaper00061699:daf-18(ok480)_downregulated
WBPaper00061753:csr-1(tor159)_upregulated_25C
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00062590:Aging_downregulated_hypodermis
WBPaper00062669:extracellular-vesicle_protein
WBPaper00064055:trl-1(cas1077)_downregulated_non-starved
WBPaper00064071:NHR-49_interacting
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064716:paraquat_downregulated
WBPaper00064727:daf-2(e1370)_upregulated
WBPaper00064841:tent-5(tm3504)_downregulated_transcript
WBPaper00064933:bcf-1(ylf1)_downregulated_transcript
WBPaper00064952:Day5_vs_L4_upregulated_25C
WBPaper00064952:Day10_vs_L4_upregulated_20C
WBPaper00064952:Day10_vs_L4_upregulated_25C
WBPaper00065120:body-muscle-transcriptome
WBPaper00065373:Cisplatin_upregulated_WT
WBPaper00065835:Day11_vs_Day1_downregulated
WBPaper00065841:4_1
WBPaper00065841:4_2
WBPaper00065841:18_0
WBPaper00065945:epidermis-rpoa-2(-)_upregulated_protein
WBPaper00065975:P-body_vs_oocyte_depleted
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066085:sin-3(syb2172)_upregulated
WBPaper00066085:sin-3(tm1276)_upregulated
WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
cgc4386_cluster_2_2
cgc4489_group_11
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00031003:0hr_muscle_enriched
WBPaper00031003:24hr_muscle_enriched
WBPaper00031003:hlh_1_enriched
WBPaper00031003:total_muscle_enriched
WBPaper00031060:2-deoxy-D-glucose_upregulated
WBPaper00031532:Larva_Pan_Neuronal_Depleted
WBPaper00032062:age_regulated_genes
WBPaper00032165:differentially_expressed_with_age_medoid_6
WBPaper00032948:StarveUp2
WBPaper00035560:ahr-1_downregulated
WBPaper00035873:dpy-10_regulated
WBPaper00036286:Pattern_D
WBPaper00036375:depleted_in_PVD_OLL
WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2up
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00041174:environmental
WBPaper00041174:environmental_prime
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00042274:tbx-2(bx59)_upregulated
WBPaper00045263:0.1mM-paraquat_downregulated
WBPaper00048637:lin-35(n745)_starvation_downregulated
WBPaper00048989:eat-2(ad465)_upregulated_in-DMSO
WBPaper00053236:daf-16(mgDF50)_regulated_Starved
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
WBPaper00057098:SiO2-nanoparticles_downregulated
Interaction (157)
Map_infoMapVPosition1.79465Error0.029413
PositivePositive_cloneH14N18Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene