Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00018808

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00018808SMapS_parentSequenceF54D10
IdentityVersion1
NameSequence_nameF54D10.7
Molecular_nameF54D10.7
F54D10.7.1
CE19457
Other_nameCELE_F54D10.7Accession_evidenceNDBBX284602
Public_nameF54D10.7
DB_infoDatabaseAceViewgene2E110
WormQTLgeneWBGene00018808
WormFluxgeneWBGene00018808
NDBlocus_tagCELE_F54D10.7
NCBIgene173728
RefSeqproteinNM_062260.6
TREEFAMTREEFAM_IDTF327404
TrEMBLUniProtAccQ9TZ84
UniProt_GCRPUniProtAccQ9TZ84
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:00WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (43)
StrainWBStrain00037494
RNASeq_FPKM (74)
GO_annotation00097882
00097883
00097884
00097885
OrthologWBGene00154453Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00158101Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00152652Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00153798Caenorhabditis brenneriFrom_analysisInparanoid_8
chrII_pilon.g4121Caenorhabditis elegansFrom_analysisWormBase-Compara
chrII_pilon.g4122Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionEnables identical protein binding activity.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF54D10.7
Corresponding_transcriptF54D10.7.1
Other_sequenceSR03728
SRC04886_1
FC813236.1
FC819027.1
FC819330.1
Associated_featureWBsf987393
WBsf987394
WBsf222884
Experimental_infoRNAi_resultWBRNAi00048291Inferred_automaticallyRNAi_primary
WBRNAi00015604Inferred_automaticallyRNAi_primary
WBRNAi00007610Inferred_automaticallyRNAi_primary
WBRNAi00000869Inferred_automaticallyRNAi_primary
WBRNAi00032779Inferred_automaticallyRNAi_primary
Expr_patternExpr1023118
Expr1038112
Expr1152091
Expr2004136
Expr2022360
Drives_constructWBCnstr00026267
Construct_productWBCnstr00026267
Microarray_results (15)
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00032479:CB4856vsN2_LifeStageProfile_Variation
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_embryo_enriched
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00040560:hpl-2_embryo_downregulated
WBPaper00042477:rsr-2(RNAi)_downregulated_TilingArray
WBPaper00044736:rising_dev_expression
WBPaper00044760:germline_specific
WBPaper00045521:Oogenic
WBPaper00045571:germline-ablation_downregulated
WBPaper00045618:fbf-1_downregulated
WBPaper00045618:puf-8_downregulated
WBPaper00046337:polysomal_daf-2_vs_daf-2;daf-16_upregulated
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00048988:neuron_expressed
WBPaper00049498:npr-1(ur89)_regulated_6
WBPaper00050163:chd-3(eh4)_downregulated_100-cell-embryo
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050686:glp-1(e2141)_downregulated
WBPaper00051039:germline_enriched
WBPaper00051265:F4_hrde-1(tm1200)_upregulated
WBPaper00052884:emb-4(hc60)_downregulated
WBPaper00053154:human-amyloid-beta_tau_regulated
WBPaper00053184:sma-2(rax5)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053599:female_vs_male_upregulated
WBPaper00053599:mitosis_vs_meiosis_downregulated
WBPaper00053599:oocyte_vs_mitosis_downregulated
WBPaper00053810:daf-2(e1370)_downregulated
WBPaper00053810:nuo-6(qm200)_downregulated
WBPaper00053909:N2_vs_CB4856_upregulated
WBPaper00054493:hpl-2(tm1489)_downregulated
WBPaper00054758:alg-1(gk204)_downregulated
WBPaper00055013:hmg-3(bar24)_upregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00055941:atfs-1(et15)_downregulated
WBPaper00055941:nuo-6(qm200)_downregulated
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056034:pals-22(jy3)_downregulated
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_downregulated_N2
WBPaper00056139:soil-microbiota_downregulated
WBPaper00056161:hermaphrodite_enriched_siRNA
WBPaper00056169:rrf-3(pk1426)_downregulated_embryo
WBPaper00056169:rrf-3(pk1426)_upregulated_L4
WBPaper00056290:hsp-6(mg585)_downregulated
WBPaper00056330:glycine_upregulated
WBPaper00057288:Cold_downregulated_transcript
WBPaper00057288:iff-1(RNAi)_downregulated_transcript
WBPaper00058598:mex-1(or286)_downregulated
WBPaper00058598:mex-3(eu149)_downregulated
WBPaper00058598:sin-3(tm1276)_upregulated
WBPaper00058948:PA14_upregulated
WBPaper00059664:srbc-48(ac23)_downregulated
WBPaper00059728:5ug_cholesterol_downregulated
WBPaper00059728:20ug_cholesterol_downregulated
WBPaper00059739:hira-1(gk835598)_upregulated_L4
WBPaper00059987:Wounding_downregulated
WBPaper00060014:set-2(tm1630)_upregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060445:ikb-1(nr2027)_upregulated_L4
WBPaper00060445:nfki-1(cer1)_ikb-1(nr2027)_upregulated_L4
WBPaper00060445:nfki-1(cer1)_upregulated_L4
WBPaper00060459:bcat-1(RNAi)_downregulated
WBPaper00060661:sensory-neuron_depleted
WBPaper00060683:hlh-11(ko1)_downregulated
WBPaper00060764:swsn-1(os22ts)_downregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060909:atfs-1(cmh15)_upregulated
WBPaper00061007:S.aquatilis_downregulated
WBPaper00061081:E.faecalis_downregulated_N2
WBPaper00061203:sin-3(tm1276)_downregulated
WBPaper00061203:spr-1(ok2144)_downregulated
WBPaper00061439:unc-30(ok613)_downregulated_P.aeruginosa-infection
WBPaper00061527:C17E7.4-T06D4.1
WBPaper00061653:alh-4(hj221)_upregulated
WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR
WBPaper00062118:neural-HSF-1_upregulated
WBPaper00062146:MOG-7-degron_2h_regulated
WBPaper00062159:hda-2(ok1479)_downregulated
WBPaper00062446:nhr-8(hd117)_downregulated
WBPaper00062456:doxycycline_downregulated_N2_transcript
WBPaper00064080:let-7_miRNA_interacting
WBPaper00064229:B.thuringiensis-Cry5Ba_downregulated
WBPaper00064494:postdauer_downregulated_WholeAnimal
WBPaper00064632:daf-2(e1370)_downregulated_intestine
WBPaper00064716:paraquat_upregulated
WBPaper00064933:bcf-1(ylf1)_downregulated_transcript
WBPaper00065074:glna(-)_upregulated
WBPaper00065096:25C_vs_20C_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065096:npr-8(ok1439)_upregulated_Day1_20C
WBPaper00065288:mdt-15(tm2182)_upregulated
WBPaper00065315:mating_upregulated_Day2-7
WBPaper00065984:pals-17(syb3980)_upregulated
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066110:Doxorubicin_downregulated_tetraploid
WBPaper00066110:tetraploid_vs_diploid_downregulated
cgc4489_group_2
WBPaper00025032:cluster_27
WBPaper00025032:PAL-1_target_genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00027111:rrf-1(pk1417)_downregulated
WBPaper00029437:dcr-1_downregulated
WBPaper00035873:dpy-9_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00035905:FBF-1_Associated
WBPaper00036130:mir-243_down_regulated
WBPaper00036286:Pattern_F
WBPaper00038427:lin-54_germline_changed
WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2down
WBPaper00040210:Diazinon_24C_regulated
WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040858:eQTL_regulated_aging
WBPaper00040858:eQTL_regulated_developing
WBPaper00040858:eQTL_regulated_old
WBPaper00040858:eQTL_regulated_reproductive
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_3h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_3h
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00045673:colistin_downregulated
WBPaper00046083:oga-1(ok1207)_OP50_upregulated
WBPaper00046083:ogt-1(ok1474)_OP50_upregulated
WBPaper00046083:pmk-1(km25)_OP50_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
WBPaper00048989:N2_rapamycin_downregulated
WBPaper00051387:Triclosan_downregulated
WBPaper00056330:mrps-5(RNAi)_downregulated
[cgc5767]:cluster_1
[cgc5767]:expression_class_M
[cgc5767]:expression_class_MD
[cgc5767]:expression_class_MD_pd(53_min)
[cgc5767]:expression_class_SM
[cgc5767]:expression_class_SMD
[cgc6390]:Cluster_E
[cgc6390]:oogenesis-enriched
Interaction (150)
Map_infoPositivePositive_cloneF54D10Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII-6.20964
MethodGene