Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00018762

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00018762SMapS_parentSequenceF53E10
IdentityVersion1
NameSequence_nameF53E10.6
Molecular_nameF53E10.6
F53E10.6.1
CE10930
Other_nameCELE_F53E10.6Accession_evidenceNDBBX284605
Public_nameF53E10.6
DB_infoDatabaseAceViewgene5D80
WormQTLgeneWBGene00018762
WormFluxgeneWBGene00018762
NDBlocus_tagCELE_F53E10.6
PanthergeneCAEEL|WormBase=WBGene00018762|UniProtKB=P91318
familyPTHR13245
NCBIgene178728
RefSeqproteinNM_071312.4
SwissProtUniProtAccP91318
TREEFAMTREEFAM_IDTF106119
UniProt_GCRPUniProtAccP91318
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:00WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (48)
RNASeq_FPKM (74)
GO_annotation00050597
00050598
00050599
00123790
Ortholog (31)
Structured_descriptionAutomated_descriptionPredicted to be involved in maturation of 5.8S rRNA and maturation of LSU-rRNA. Predicted to be part of preribosome, large subunit precursor. Expressed in several structures, including body wall musculature and gonad. Is an ortholog of human RRP15 (ribosomal RNA processing 15 homolog).Paper_evidenceWBPaper00065943
Curator_confirmed (2)
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF53E10.6
Corresponding_transcriptF53E10.6.1
Other_sequenceCRC04728_1
CR08627
Acan_isotig14017
CJC15923_1
CR08626
Associated_featureWBsf652508
WBsf999514
WBsf999515
WBsf999516
WBsf999517
WBsf1019300
WBsf1019301
WBsf233422
Experimental_infoRNAi_resultWBRNAi00075880Inferred_automaticallyRNAi_primary
WBRNAi00008834Inferred_automaticallyRNAi_primary
WBRNAi00061681Inferred_automaticallyRNAi_primary
WBRNAi00048125Inferred_automaticallyRNAi_primary
WBRNAi00025587Inferred_automaticallyRNAi_primary
WBRNAi00033509Inferred_automaticallyRNAi_primary
Expr_patternExpr13601
Expr1029028
Expr1038083
Expr1151934
Expr2004061
Expr2022285
Drives_constructWBCnstr00026287
Construct_productWBCnstr00026287
Microarray_results (18)
Expression_clusterWBPaper00032097:CGH-1-associated-mRNA
WBPaper00032425:up_in_lin-35
WBPaper00032425:up_in_rde-4
WBPaper00032425:up_in_zfp-1
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00042194:nhr-114(RNAi)_upregulated
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044501:gld-1_let-7_regulated
WBPaper00044656:tatn-1(qd182)_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00045521:Gender_Neutral
WBPaper00045774:clk-1_downregulated
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
WBPaper00047132:skn-1(RNAi)_downregulated_glp-1(ts)-dependent
WBPaper00048923:Aging_regulated
WBPaper00048988:neuron_expressed
WBPaper00049545:cco-1(RNAi)_downregulated
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
WBPaper00049942:hsf-1(RNAi)_downregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050686:glp-1(e2141)_downregulated
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050743:elli-1(sam-3)_downregulated
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:seam_expressed
WBPaper00051039:germline_enriched
WBPaper00051245:intestine_nucleus_expressed
WBPaper00051245:nucleus_specific
WBPaper00052884:emb-4(hc60)_downregulated
WBPaper00053289:DREAM-target
WBPaper00053302:stavudine_24h_regulated
WBPaper00053388:dauer_regulated_Cluster6
WBPaper00053599:oocyte_vs_mitosis_upregulated
WBPaper00053713:Pheromone-induced_postdauer_vs_control_downregulated
WBPaper00053810:daf-2(e1370)_downregulated
WBPaper00053810:isp-1(qm150)_downregulated
WBPaper00053810:nuo-6(qm200)_downregulated
WBPaper00055049:S.gordonii_downregulated
WBPaper00055482:pmt-2(RNAi)_downregulated
WBPaper00055648:germline_expressed
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00056471:S.aureus-4h_downregulated_N2
WBPaper00057041:spc-1(cas971)_upregulated
WBPaper00057041:unc-70(cas983)_upregulated
WBPaper00057288:Cold_downregulated_transcript
WBPaper00058691:sin-3(tm1276)_downregulated
WBPaper00058958:100mGy-irradiation-72h_upregulated
WBPaper00060459:bcat-1(RNAi)_downregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00061340:M_cell
WBPaper00061341:28C_24h_downregulated
WBPaper00061341:28C_48h_downregulated
WBPaper00061466:nath-10(icb99)_downregulated
WBPaper00061527:B0491.7-Y54E10A.10
WBPaper00061692:acivicin_downregulated
WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR
WBPaper00062159:hda-2(ok1479)_downregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062498:PPM-1.D_interacting
WBPaper00064071:NHR-49_interacting
WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064130:Beta-Amyloid_downregulated_protein
WBPaper00064315:mes-3(bn199)_downregulated_PGCs
WBPaper00064315:mes-4(bn73)_downregulated_PGCs
WBPaper00064403:Heat-killed-E.Coli_upregulated
WBPaper00064716:paraquat_upregulated
WBPaper00065945:global-rpoa-2(-)_upregulated_transcript
WBPaper00065975:P-body_vs_WholeAnimal_enriched
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
cgc4489_group_4
WBPaper00024393:strongly_regulated_dauer_genes
WBPaper00025032:cluster_30
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00031832:slr-2_regulated
WBPaper00032165:A_to_C_transit_decreased
WBPaper00032948:FedUp
WBPaper00035905:FBF-1_Associated
WBPaper00036286:Pattern_H
WBPaper00037611:GLD-2-associated
WBPaper00038231:Cry5B_1.5-fold_downregulated
WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2down
WBPaper00040426:CYD-1_CDK-4_upregulated
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00042128:gei-8(ok1671)_downregulated
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00045263:nuo-6(qm200)_downregulated
WBPaper00047070:DAF-16-dependent_UV_response
WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
[cgc5767]:cluster_2
[cgc5767]:expression_class_E
[cgc5767]:expression_class_E_pi(83_min)
[cgc5767]:expression_class_M
[cgc5767]:expression_class_ME
Interaction (32)
Map_infoPositivePositive_cloneF53E10Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV-13.7328
ReferenceWBPaper00038491
WBPaper00055090
WBPaper00060275
MethodGene