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WormBase Tree Display for Gene: WBGene00017339

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Name Class

WBGene00017339SMapS_parentSequenceF10D7
IdentityVersion2
NameCGC_namemfsd-10
Sequence_nameF10D7.2
Molecular_nameF10D7.2
F10D7.2.1
CE04352
Other_nameCELE_F10D7.2Accession_evidenceNDBBX284606
Public_namemfsd-10
DB_infoDatabaseAceViewgeneXR980
WormQTLgeneWBGene00017339
WormFluxgeneWBGene00017339
NDBlocus_tagCELE_F10D7.2
PanthergeneCAEEL|WormBase=WBGene00017339|UniProtKB=Q19296
familyPTHR23504
NCBIgene181765
RefSeqproteinNM_078413.6
TREEFAMTREEFAM_IDTF314512
TrEMBLUniProtAccQ19296
UniProt_GCRPUniProtAccQ19296
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:58WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
230 Mar 2020 18:06:40WBPerson1983Name_changeCGC_namemfsd-10
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmfsd
Allele (64)
StrainWBStrain00001837
RNASeq_FPKM (74)
GO_annotation00064259
00064260
00064261
00064262
00122764
00122765
Ortholog (35)
Paralog (12)
Structured_descriptionAutomated_descriptionPredicted to enable transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be located in brush border membrane. Expressed in head. Is an ortholog of human MFSD10 (major facilitator superfamily domain containing 10).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF10D7.2
Corresponding_transcriptF10D7.2.1
Other_sequence (13)
Associated_featureWBsf1008888
WBsf1008889
WBsf1025011
WBsf1025012
Experimental_infoRNAi_resultWBRNAi00030767Inferred_automaticallyRNAi_primary
WBRNAi00002347Inferred_automaticallyRNAi_primary
WBRNAi00013055Inferred_automaticallyRNAi_primary
WBRNAi00044250Inferred_automaticallyRNAi_primary
Expr_patternChronogram1582
Expr5717
Expr1014699
Expr1037453
Expr1148208
Expr2002391
Expr2020609
Drives_constructWBCnstr00002631
WBCnstr00027374
Construct_productWBCnstr00027374
Microarray_results (18)
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00033065:cyc-1(RNAi)_downregulated
WBPaper00033070:Rhine_downregulated
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00042215:wdr-23(tm1817)_upregulated
WBPaper00044736:flat_dev_expression
WBPaper00044760:somatic_specific
WBPaper00045417:128Q-huntingtin_downreglated
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045521:Oogenic
WBPaper00045729:gld-2(RNAi)_downregulated
WBPaper00045934:wrn-1(gk99)_downregulated
WBPaper00048988:daf-16(mu86)_upregulated_neuron
WBPaper00048988:neuron_expressed
WBPaper00050163:chd-3(eh4)_downregulated_100-cell-embryo
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050990:arcade_intestinal-valve_enriched
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00051404:alg-1(gk214)_downregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053321:PGCs_depleted_NuGen
WBPaper00053388:dauer_regulated_Cluster5
WBPaper00053599:female_vs_male_upregulated
WBPaper00053599:mitosis_vs_meiosis_downregulated
WBPaper00053599:oocyte_vs_mitosis_downregulated
WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_upregulated
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056586:kri-1(ok1251)_upregulated
WBPaper00056855:his-72(uge40)_downregulated
WBPaper00057041:unc-70(cas983)_upregulated
WBPaper00057288:Cold_downregulated_transcript
WBPaper00058948:PA14_downregulated
WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
WBPaper00059471:EGL-43_interacting
WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
WBPaper00060014:set-2(zr2012)_downregulated
WBPaper00060084:cco-1(RNAi)_downregulated_N2
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00061340:Excretory_cell
WBPaper00061340:Excretory_cell_parent
WBPaper00061340:Parents_of_PHsh_hyp8_hyp9
WBPaper00061340:Parent_of_K_Kprime
WBPaper00061439:unc-30(ok613)_upregulated
WBPaper00061527:uggt-1_21889-tag-320_20312
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062446:nhr-8(hd117)_upregulated
WBPaper00064005:starvation_downregulated_N2_mRNA
WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065158:AFD_depleted
WBPaper00065373:Cisplatin_downregulated_WT
WBPaper00065841:15_0
WBPaper00065841:78_0
WBPaper00065841:146_0
WBPaper00065975:P-body_vs_oocyte_enriched
WBPaper00065975:P-body_vs_WholeAnimal_enriched
cgc4489_group_6
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00030985:Serratia_marcesens_upregulated
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:24hr_muscle_depleted
WBPaper00031003:total_muscle_depleted
WBPaper00032948:FedUp
WBPaper00035588:alg-1(-)_upregulated
WBPaper00037611:GLD-2-associated
WBPaper00038231:Cry5B_1.5-fold_upregulated
WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2down
WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
WBPaper00040963:Q100_down
WBPaper00040963:Q200_down
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00042331:a-SWCNTs_downregulated
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00045263:isp-1(qm150)_upregulated
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00045263:ProLongevity-mtROS_upregulated
WBPaper00047070:N2_starvation_downregulated
WBPaper00057098:SiO2-nanoparticles_upregulated
[cgc5376]:let-60(G12V)-regulated_genes
[cgc5767]:expression_class_E
[cgc5767]:expression_class_E_pi(101_min)
[cgc5767]:expression_class_E_pi(122_min)
[cgc5767]:expression_class_M
[cgc5767]:expression_class_ME
[cgc6390]:Cluster_B
Interaction (3)
Map_infoMapXPosition24.0888
PositivePositive_cloneF10D7Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene