WormBase Tree Display for Gene: WBGene00017078

WBGene00017078 SMap: S_parent: Sequence: D2096
  Identity: Version: 1
    Name: Sequence_name: D2096.11
      Molecular_name: D2096.11
        D2096.11.1
        CE33608
        D2096.11.2
        D2096.11.3
      Other_name: CELE_D2096.11 Accession_evidence: NDB BX284604
      Public_name: D2096.11
    DB_info: Database: AceView gene 4J154C
            4J154
        WormQTL gene WBGene00017078
        WormFlux gene WBGene00017078
        NDB locus_tag CELE_D2096.11
        Panther gene CAEEL|WormBase=WBGene00017078|UniProtKB=Q19011
          family PTHR23167
        NCBI gene 177638
        RefSeq protein NM_001392350.1
        TREEFAM TREEFAM_ID TF323754
        TrEMBL UniProtAcc Q19011
        UniProt_GCRP UniProtAcc Q19011
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:58 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (56)
    Strain: WBStrain00003589
    RNASeq_FPKM (74)
    GO_annotation: 00063232
      00063233
      00063234
      00063235
      00063236
      00122560
      00122561
    Ortholog (29)
    Paralog (13)
    Structured_description: Automated_description: Predicted to enable microtubule binding activity. Predicted to be involved in actin cytoskeleton organization. Predicted to be located in microtubule organizing center. Predicted to be part of filamentous actin. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: D2096.11
    Corresponding_CDS_history: D2096.11:wp82
      D2096.11:wp96
    Corresponding_transcript: D2096.11.1
      D2096.11.2
      D2096.11.3
    Associated_feature: WBsf997203
      WBsf997204
      WBsf997205
      WBsf997206
      WBsf1017833
      WBsf1017834
      WBsf1017835
      WBsf230419
  Experimental_info: RNAi_result: WBRNAi00017205 Inferred_automatically: RNAi_primary
      WBRNAi00007760 Inferred_automatically: RNAi_primary
      WBRNAi00077918 Inferred_automatically: RNAi_primary
      WBRNAi00002392 Inferred_automatically: RNAi_primary
      WBRNAi00043524 Inferred_automatically: RNAi_primary
      WBRNAi00050955 Inferred_automatically: RNAi_primary
      WBRNAi00030429 Inferred_automatically: RNAi_primary
      WBRNAi00043525 Inferred_automatically: RNAi_primary
      WBRNAi00012604 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr5634
      Expr1029007
      Expr1147518
      Expr2002100
      Expr2020325
    Drives_construct: WBCnstr00004039
      WBCnstr00027584
    Construct_product: WBCnstr00027584
    Microarray_results (19)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00032425:down_in_alg-1
      WBPaper00032425:down_in_lin-35
      WBPaper00033065:cyc-1(RNAi)_downregulated
      WBPaper00035269:cde-1_regulated
      WBPaper00036375:enriched_in_PVD_OLL
      WBPaper00038118:aak-2(gt33)_upregulated
      WBPaper00038168:lin-15B(n744)_downregulated
      WBPaper00038168:lin-15B(n744)_upregulated
      WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
      WBPaper00044656:tatn-1(qd182)_downregulated
      WBPaper00044760:germline_specific
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00045774:clk-1_upregulated
      WBPaper00046509:lin-35(n745)_downregulated
      WBPaper00048971:daf-16(mgDf50)_downregulated_L1
      WBPaper00048988:neuron_expressed
      WBPaper00049942:hsf-1(RNAi)_upregulated
      WBPaper00049954:BPA_downregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:downregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051558:aging_regulated
      WBPaper00052884:emb-4(hc60)_downregulated
      WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
      WBPaper00053321:embryo-to-L1_upregulated_nos-1(gv5)nos-2(RNAi)_SMARTseq
      WBPaper00053321:PGCs_enriched_NuGen
      WBPaper00053810:clk-1(qm30)_upregulated
      WBPaper00053810:daf-2(e1370)_upregulated
      WBPaper00053810:isp-1(qm150)_upregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00055060:flr-1(RNAi)_upregulated
      WBPaper00055334:DLC-1_interacting
      WBPaper00055354:eat-2(ad1116)_upregulated
      WBPaper00055354:Psora-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Metformin_upregulated
      WBPaper00055648:germline_expressed
      WBPaper00055862:antimycin_damt-1(gk961032)_regulated
      WBPaper00055971:nhl-2(ok818)_25C_upregulated
      WBPaper00056443:sek-1(km4)_downregulated
      WBPaper00056826:hmc_biased
      WBPaper00056997:nmad-1(ok3133)_downregulated_germline_25C
      WBPaper00057041:unc-70(cas983)_downregulated
      WBPaper00057288:Cold_downregulated_transcript
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
      WBPaper00060661:hypoxia_upregulated
      WBPaper00061341:28C_24h_downregulated
      WBPaper00061439:unc-30(ok613)_downregulated
      WBPaper00061439:unc-30(ok613)_downregulated_P.aeruginosa-infection
      WBPaper00062056:dpl-1(n2994)_downregulated
      WBPaper00062056:lin-35(n745)_downregulated
      WBPaper00062146:MOG-7-degron_1h_regulated
      WBPaper00062146:MOG-7-degron_2h_regulated
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00065149:lin-52(n771)_downregulated
      WBPaper00065749:Heat-Shock_upregulated_endu-2(tm4977)
      WBPaper00065749:Heat-Shock_upregulated_N2
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066085:sin-3(tm1276)_downregulated
      WBPaper00066110:Cisplatin_downregulated_diploid
      WBPaper00066110:Doxorubicin_downregulated_diploid
      WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
      cgc4489_group_25
      WBPaper00024671:AFD_AWB_vs_unsorted_upregulated
      WBPaper00025032:cluster_101
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00026929:Resveratrol_regulated_daf-16
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00031832:slr-2_regulated
      WBPaper00032165:differentially_expressed_with_age_medoid_7
      WBPaper00035905:FBF-1_Associated
      WBPaper00036286:Pattern_B
      WBPaper00036286:Pattern_H
      WBPaper00040210:Chlorpyrifos_24C_regulated
      WBPaper00040858:eQTL_age_regulated_aging
      WBPaper00040858:eQTL_regulated_old
      WBPaper00040963:TA300_down
      WBPaper00041002:HF_3d_2.0mM_Down
      WBPaper00041606:CE_B.thuringiensis-DB27_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00042274:tbx-2(bx59)_downregulated
      WBPaper00045263:0.1mM-paraquat_upregulated
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_SM
    Interaction: WBInteraction000110298
      WBInteraction000198570
      WBInteraction000282195
      WBInteraction000307225
      WBInteraction000360542
      WBInteraction000421532
      WBInteraction000436941
      WBInteraction000447349
  Map_info: Positive: Positive_clone: D2096 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV 3.75249
  Reference: WBPaper00038491
    WBPaper00055090
  Method: Gene