WormBase Tree Display for Gene: WBGene00017011

WBGene00017011 SMap: S_parent: Sequence: D1007
  Identity: Version: 2
    Name: CGC_name: eaf-1 Person_evidence: WBPerson2977
      Sequence_name: D1007.16
      Molecular_name: D1007.16
        D1007.16.1
        CE40450
      Other_name: CELE_D1007.16 Accession_evidence: NDB BX284601
      Public_name: eaf-1
    DB_info: Database: AceView gene 1F171
        WormQTL gene WBGene00017011
        WormFlux gene WBGene00017011
        NDB locus_tag CELE_D1007.16
        Panther gene CAEEL|WormBase=WBGene00017011|UniProtKB=Q9TXQ9
          family PTHR15970
        NCBI gene 172065
        RefSeq protein NM_001379866.3
        TREEFAM TREEFAM_ID TF320864
        TrEMBL UniProtAcc Q9TXQ9
        UniProt_GCRP UniProtAcc Q9TXQ9
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:58 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 19 Feb 2010 14:17:26 WBPerson2970 Name_change: CGC_name: eaf-1
    Status: Live
  Gene_info (8)
  Disease_info: Experimental_model: DOID:162 Homo sapiens Paper_evidence: WBPaper00040146
          Curator_confirmed: WBPerson324
          Date_last_updated: 10 Aug 2023 00:00:00
    Potential_model: DOID:10283 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:23115)
  Models_disease_in_annotation: WBDOannot00001402
  Molecular_info: Corresponding_CDS: D1007.16
    Corresponding_CDS_history: D1007.16:wp165
    Corresponding_transcript: D1007.16.1
    Other_sequence (14)
    Associated_feature: WBsf643225
      WBsf656237
      WBsf217547
  Experimental_info: RNAi_result: WBRNAi00089552 Inferred_automatically: RNAi_primary
      WBRNAi00117064 Inferred_automatically: RNAi_primary
      WBRNAi00030308 Inferred_automatically: RNAi_primary
      WBRNAi00043326 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr9668
      Expr1026394
      Expr1037309
      Expr1147304
      Expr2011145
      Expr2029381
    Drives_construct: WBCnstr00009358
    Construct_product: WBCnstr00009358
    Microarray_results (18)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00033065:isp-1-1(qm150)_upregulated
      WBPaper00036375:enriched_in_PVD_OLL
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044656:tatn-1(qd182)_downregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00044760:germline_specific
      WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_downregulated
      WBPaper00045420:fertilization_upregulated_protein
      WBPaper00045521:Gender_Neutral
      WBPaper00045571:germline-ablation_downregulated
      WBPaper00046795:starvation_downregulated
      WBPaper00048988:neuron_expressed
      WBPaper00049498:npr-1(ur89)_regulated_6
      WBPaper00049545:jmjd-3.1(+)_downregulated
      WBPaper00049920:Glucose-Diet_downregulated_N2
      WBPaper00050344:AFD-neuron_enriched
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:OsmoticStress_regulated_NoFood
      WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:pharynx_expressed
      WBPaper00050990:seam_expressed
      WBPaper00051039:germline_enriched
      WBPaper00052884:emb-4(hc60)_downregulated
      WBPaper00053184:sma-2(rax5)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053321:PGCs_enriched_NuGen
      WBPaper00054758:alg-1(gk204)_downregulated
      WBPaper00055354:Rifampicin_downregulated
      WBPaper00055648:germline_expressed
      WBPaper00055827:pfd-6(gk493446)_upregulated
      WBPaper00056034:pals-22(jy3)_downregulated
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056090:E.faecalis_downregulated_N2
      WBPaper00056284:ints-5(RNAi)_downregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
      WBPaper00056826:SGP_biased
      WBPaper00058598:sin-3(tm1276)_upregulated
      WBPaper00059356:BAZ-2_SET-6_interacting
      WBPaper00059664:srbc-48(ac23)_downregulated
      WBPaper00059763:neuron_expressed
      WBPaper00060014:set-2(tm1630)_upregulated
      WBPaper00060661:sensory-neuron_depleted
      WBPaper00060683:hlh-11(ko1)_downregulated
      WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00060909:atfs-1(cmh15)_upregulated
      WBPaper00061007:HB101_downregulated
      WBPaper00061007:S.aquatilis_downregulated
      WBPaper00061203:let-418(n3536)_downregulated
      WBPaper00061203:sin-3(tm1276)_downregulated
      WBPaper00061203:spr-1(ok2144)_downregulated
      WBPaper00061439:unc-30(ok613)_downregulated
      WBPaper00061439:unc-30(ok613)_downregulated_P.aeruginosa-infection
      WBPaper00061527:cyn-10_19153-K12H4.2
      WBPaper00062159:hda-2(ok1479)_downregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064716:paraquat_upregulated
      WBPaper00065258:anchor-cell_enriched
      WBPaper00065975:P-body_vs_oocyte_enriched
      WBPaper00065975:P-body_vs_WholeAnimal_enriched
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066110:tetraploid_vs_diploid_downregulated
      WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
      cgc4489_group_2
      WBPaper00025032:cluster_3
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00026929:Resveratrol_regulated_daf-16
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00035873:dpy-9_regulated
      WBPaper00035873:dpy-10_regulated
      WBPaper00035905:FBF-1_Associated
      WBPaper00036286:Pattern_F
      WBPaper00036383:ash-2_Day8_regulated
      WBPaper00037147:heatshock_upregulated
      WBPaper00037695:LD_DD_6-day
      WBPaper00038060:SUMO-1_upregulated
      WBPaper00038427:lin-54_embryo_changed
      WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2down
      WBPaper00040963:TA300_down
      WBPaper00041606:CE_B.thuringiensis-DB27_regulated
      WBPaper00041606:CE_S.marcescens_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
      WBPaper00045263:0.1mM-paraquat_upregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
    Interaction: WBInteraction000113735
      WBInteraction000505000
      WBInteraction000505002
      WBInteraction000505003
      WBInteraction000505004
      WBInteraction000517211
      WBInteraction000517212
      WBInteraction000525339
      WBInteraction000547229
  Map_info: Map: I Position: -1.03815 Error: 0.000663
    Positive: Positive_clone: D1007 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00040146
    WBPaper00045125
    WBPaper00046728
    WBPaper00055090
    WBPaper00059863
    WBPaper00064339
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene