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WormBase Tree Display for Gene: WBGene00016398

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Name Class

WBGene00016398SMapS_parentSequenceC34D4
IdentityVersion1
NameSequence_nameC34D4.2
Molecular_nameC34D4.2
C34D4.2.1
CE29211
Other_nameCELE_C34D4.2Accession_evidenceNDBBX284604
Public_nameC34D4.2
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:57WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (23)
RNASeq_FPKM (74)
GO_annotation00079688
00079689
00079690
00079691
00079692
00079693
00079694
00122037
Ortholog (57)
Paralog (45)
Structured_descriptionAutomated_descriptionPredicted to enable protein serine/threonine phosphatase activity. Predicted to be located in cytoplasm and nucleus.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC34D4.2
Corresponding_transcriptC34D4.2.1
Other_sequenceCRC00021_1
JI459190.1
SRC05490_1
CR00456
JI174036.1
CBC07037_1
FC813664.1
JO475713.1
CJC06919_1
FC819533.1
Associated_featureWBsf660265
WBsf996905
WBsf228509
Experimental_infoRNAi_resultWBRNAi00011598Inferred_automaticallyRNAi_primary
WBRNAi00041874Inferred_automaticallyRNAi_primary
WBRNAi00029521Inferred_automaticallyRNAi_primary
Expr_patternExpr1012894
Expr1145891
Expr2001394
Expr2019617
Drives_constructWBCnstr00028103
Construct_productWBCnstr00028103
Microarray_results (19)
Expression_clusterWBPaper00032528:L3_depleted
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00042194:nhr-114(RNAi)_upregulated
WBPaper00042215:wdr-23(tm1817)_upregulated
WBPaper00044037:eat-2_regulated_nhr-62_dependent
WBPaper00044037:eat-2_upregulated
WBPaper00044316:CH3HgCl_7.5uM_upregulated
WBPaper00044736:rising_dev_expression
WBPaper00044743:wdr-23_neuron_upregulated
WBPaper00044760:germline_specific
WBPaper00044786:lem-2(tm1582)_upregulated
WBPaper00045521:Spermatogenic
WBPaper00045729:gld-2(RNAi)_upregulated
WBPaper00046805:csr-1(RNAi)_upregulated_Set1
WBPaper00046805:csr-1(RNAi)_upregulated_Set2
WBPaper00046805:P-granule-RNAi_upregulated_Set1
WBPaper00048611:MnCl2_downregulated
WBPaper00048762:FOG-3_associated
WBPaper00049134:hpk-1(pk1393)_upregulated
WBPaper00049498:npr-1(ur89)_regulated_2
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
WBPaper00049920:Glucose-Diet_upregulated_hyl-2(tm2031)
WBPaper00049920:Glucose-Diet_upregulated_N2
WBPaper00049942:HeatShock_downregulated_hsf-1(RNAi)
WBPaper00050231:male_enriched
WBPaper00050522:mafr-1(tm6082)_downregulated
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00051404:alg-2(ok304)_downregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053295:lin-22(icb38)_downregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053318:Aging_downregulated_mRNA_N2
WBPaper00053318:mir-71(n4115)_downregulated_mRNA
WBPaper00053388:dauer_regulated_Cluster6
WBPaper00053599:female_vs_male_downregulated
WBPaper00053657:JU2519_M.humicola-infection_24hr
WBPaper00053810:isp-1(qm150)_downregulated
WBPaper00054191:H3.3(null)_L1_downregulated
WBPaper00054410:set-9(rw5)_downregulated
WBPaper00054493:hpl-2(tm1489)_upregulated
WBPaper00054872:egl-9(sa307)_downregulated
WBPaper00055013:hmg-3(bar24)_downregulated
WBPaper00055060:flr-1(RNAi)_upregulated
WBPaper00055354:Rapamycin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055386:daf-2(e1370)_upregulated
WBPaper00055386:eat-2(ad465)_upregulated
WBPaper00055482:pmt-2(RNAi)_upregulated
WBPaper00055648:sperm_expressed
WBPaper00055804:FBF-1-FBF-2-associated_spermatogenic-enriched
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00055971:nhl-2(ok818)_20C_downregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056034:pals-22(jy3)_upregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_upregulated_N2
WBPaper00056161:male_enriched_siRNA
WBPaper00056167:Cry5B_downregulated
WBPaper00056290:hsp-6(mg585)_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056809:smn-1(ok355)_downregulated
WBPaper00058711:wdr-5(ok1417)_upregulated
WBPaper00058948:npr-8(ok1439)_downregulated_OP50
WBPaper00059117:B.subtilis_upregulated
WBPaper00059253:stearic-acid_downregulated
WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
WBPaper00059426:SiO2-nanoparticles_upregulated
WBPaper00059605:mut-16(pk710)_upregulated
WBPaper00059728:5ug_cholesterol_upregulated
WBPaper00059728:20ug_cholesterol_upregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060683:hlh-11(ko1)_upregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060921:cat-2(e1112)_downregulated
WBPaper00060921:tbh-1(ok1196)_downregulated
WBPaper00061007:HB101_upregulated
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061081:E.faecalis_upregulated_N2
WBPaper00061340:URX
WBPaper00061341:28C_24h_downregulated
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061424:Diet_MYb131_upregulated
WBPaper00061479:hda-1(ne4752)_upregulated
WBPaper00061479:mep-1(ne4629)_upregulated
WBPaper00061479:prg-1(tm872)_upregulated
WBPaper00061527:Y40H4A.2-ZK1053.2
WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR
WBPaper00062156:jmjd-5(zr1234)_upregulated
WBPaper00062193:hsf-1(RNAi)_upregulated
WBPaper00062456:doxycycline_upregulated_CB4856_transcript
WBPaper00062456:doxycycline_upregulated_N2_transcript
WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
WBPaper00062672:let-418(n3536)_upregulated
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064158:xpo-1(RNAi)_downregulated
WBPaper00064539:nhr-114(gk849)_downregulated
WBPaper00064716:paraquat_downregulated
WBPaper00064871:hypoxia_upregulated_F1
WBPaper00065086:N2_N.ferruginous_regulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065096:npr-8(ok1439)_upregulated_Day1_25C
WBPaper00065096:npr-8(ok1439)_upregulated_Day10_20C
WBPaper00065096:npr-8(ok1439)_upregulated_Day10_25C
WBPaper00065995:M.humicola-extract_downregulated_old-1(ok1273)
WBPaper00066038:mip-1(how5)_upregulated
WBPaper00066085:hda-3(ok1991)_upregulated
WBPaper00066093:E.coli-purE_upregulated
WBPaper00066110:Cisplatin_upregulated_diploid
WBPaper00066110:Doxorubicin_upregulated_diploid
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00066118:cyclobutrifluram_upregulated
WBPaper00066232:ash-2(RNAi)_downregulated_WT
WBPaper00066232:hsf-1(RNAi)_upregulated_ash-2
cgc4489_group_16
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00036286:Pattern_E
WBPaper00037113:CPF_16C_down-regulated
WBPaper00038172:aak-2overexpression_up_regulated
WBPaper00038172:tax-6null_down_regulated
WBPaper00040823:alg-1(gk214)_upregulated
WBPaper00040858:eQTL_regulated_developing
WBPaper00040858:eQTL_regulated_juvenile
WBPaper00040963:TA200_up
WBPaper00040963:TA300_up
WBPaper00041174:environmental
WBPaper00041174:environmental_prime
WBPaper00045263:0.1mM-paraquat_downregulated
WBPaper00045263:isp-1(qm150)_downregulated
WBPaper00045263:nuo-6(qm200)_downregulated
WBPaper00045263:ProLongevity-mtROS_downregulated
WBPaper00045673:colistin_downregulated
WBPaper00046548:dafachronic-acid_upregulated
WBPaper00046853:AOBr_M.aeruginosa-batch-culture_downregulated
WBPaper00048989:N2_rapamycin_upregulated
[cgc6390]:Cluster_D
[cgc6390]:spermatogenesis-enriched
Interaction (91)
Map_infoPositivePositive_cloneC34D4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV3.29101
MethodGene