WormBase Tree Display for Gene: WBGene00016220

WBGene00016220 SMap: S_parent: Sequence: C29F9
  Identity: Version: 1
    Name: Sequence_name: C29F9.5
      Molecular_name: C29F9.5
        C29F9.5.1
        CE52906
      Other_name: CELE_C29F9.5 Accession_evidence: NDB BX284603
      Public_name: C29F9.5
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (119)
    RNASeq_FPKM (74)
    GO_annotation: 00097908
      00097909
      00097910
      00097911
      00097912
      00121890
      00121891
      00121892
    Ortholog (21)
    Paralog: WBGene00000366 Caenorhabditis elegans From_analysis (2)
      WBGene00008209 Caenorhabditis elegans From_analysis: Panther
      WBGene00009595 Caenorhabditis elegans From_analysis (2)
      WBGene00010545 Caenorhabditis elegans From_analysis (3)
      WBGene00016221 Caenorhabditis elegans From_analysis (3)
    Structured_description: Automated_description: Predicted to enable histone acetyltransferase activity; metal ion binding activity; and transcription coregulator activity. Predicted to be involved in chromatin remodeling and regulation of DNA-templated transcription. Predicted to be located in nucleus. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C29F9.5
    Corresponding_CDS_history: C29F9.5:wp268
    Corresponding_transcript: C29F9.5.1
    Associated_feature: WBsf224331
  Experimental_info: RNAi_result: WBRNAi00098209 Inferred_automatically: RNAi_primary
      WBRNAi00011358 Inferred_automatically: RNAi_primary
      WBRNAi00006483 Inferred_automatically: RNAi_primary
      WBRNAi00041496 Inferred_automatically: RNAi_primary
      WBRNAi00029336 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1022086
      Expr1145522
    Drives_construct: WBCnstr00028236
    Construct_product: WBCnstr00028236
    Microarray_results (17)
    Expression_cluster: WBPaper00032528:L3_depleted
      WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00038438:E.faecalis_24hr_downregulated_TilingArray
      WBPaper00038438:P.lumniescens_24hr_downregulated_TilingArray
      WBPaper00038438:S.marcescens_24hr_downregulated_TilingArray
      WBPaper00045390:ubc-9(RNAi)_upregulated
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00045974:NSM_enriched_totalRNA_tiling
      WBPaper00048690:hermaphrodite-Z1-Z4-daughter_enriched
      WBPaper00048690:hermaphrodite-Z1-Z4_enriched
      WBPaper00048690:male-Z1-Z4-daughter_enriched
      WBPaper00048690:male-Z1-Z4_enriched
      WBPaper00050231:male_enriched
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_20C
      WBPaper00050488:mir-34(OverExpression)_vs_N2_regulated_adult_20C
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00053606:N2_vs_elt-2(ca15)_upregulated
      WBPaper00053888:drh-3(rrr2)_downregulated
      WBPaper00055226:adr-1(tm668)_upregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Rapamycin-Psora_upregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055482:Tunicamycin_upregulated
      WBPaper00056443:DietaryRestriction_upregulated
      WBPaper00056443:sek-1(km4)_upregulated
      WBPaper00056826:SGP_biased
      WBPaper00060014:set-2(tm1630)_upregulated
      WBPaper00061527:sre-33-ZK1025.1_8337
      WBPaper00061753:csr-1(tor159)_downregulated_20C
      WBPaper00064637:cox-5B(RNAi)_upregulated
      WBPaper00065841:57_0
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      WBPaper00066232:hsf-1(RNAi)_upregulated_ash-2
      WBPaper00066232:hsf-1(RNAi)_upregulated_WT
      cgc4489_group_14
      WBPaper00036130:mir-243_up_regulated
      WBPaper00040210:Diazinon_24C_regulated
      WBPaper00046853:AOBr_M.aeruginosa-batch-culture_upregulated
      [cgc5376]:let-60(G12V)-regulated_genes
      [cgc6390]:male_soma-enriched
    Interaction (15)
  Map_info: Positive: Positive_clone: C29F9 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III -26.9844
  Method: Gene