WormBase Tree Display for Gene: WBGene00014772

WBGene00014772 SMap: S_parent: Sequence: F56D5
  Identity: Version: 1
    Name: Sequence_name: F56D5.4
      Molecular_name: F56D5.4
      Other_name: CELE_F56D5.4 Accession_evidence: NDB BX284604
      Public_name: F56D5.4
    DB_info: Database: AceView gene 4K164
        WormQTL gene WBGene00014772
        NDB locus_tag CELE_F56D5.4
        NCBI gene 13197368
    Species: Caenorhabditis elegans
    History: Version_change: 1 27 May 2004 15:23:24 WBPerson1971 Event: Imported: Initial conversion from Pseudogene class of WS125
    Status: Live
  Gene_info: Biotype: SO:0000336
    Allele (29)
    RNASeq_FPKM (74)
    Paralog: WBGene00002278
      WBGene00016663 Caenorhabditis elegans From_analysis: modENCODE_Pseudogenes
      WBGene00019297 Caenorhabditis elegans From_analysis: modENCODE_Pseudogenes
    Structured_description: Automated_description: Enriched in AVK; germ line; head mesodermal cell; and intestine based on RNA-seq and microarray studies. Is affected by several genes including daf-16; sir-2.1; and sek-1 based on microarray and RNA-seq studies. Is affected by five chemicals including rotenone; Rifampin; and allantoin based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS_history: F56D5.4:wp99
    Corresponding_pseudogene: F56D5.4
    Associated_feature (2)
  Experimental_info: Microarray_results: SMD_F56D5.4
      178671_at
      178672_s_at
    Expression_cluster: WBPaper00033065:isp-1-1(qm150)_upregulated
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044656:tatn-1(qd182)_downregulated
      WBPaper00045521:Gender_Neutral
      WBPaper00048971:daf-16(mgDf50)_downregulated_L1
      WBPaper00051039:germline_enriched
      WBPaper00051558:aging_regulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053599:oocyte_vs_mitosis_upregulated
      WBPaper00053814:25C_downregulated_OP50
      WBPaper00053814:25C_downregulated_PY79
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055565:AVK_enriched
      WBPaper00056443:sek-1(km4)_upregulated
      WBPaper00056826:hmc_biased
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00059027:neuron-synapses_depleted
      WBPaper00059987:Wounding_upregulated
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00061203:let-418(n3536)_upregulated
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061203:spr-1(ok2144)_upregulated
      WBPaper00061439:unc-30(ok613)_downregulated
      WBPaper00061527:F12A10.2-F59E12.6
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00064735:bet-1(RNAi)_vs_N2_upregulated
      WBPaper00064735:bet-1(uth41)_vs_N2_upregulated
      WBPaper00025032:cluster_10
      WBPaper00025032:cluster_12
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00031832:slr-2_regulated
      WBPaper00034757:up_by_oxidative_stress
      WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_EtBr-exposed_51h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
      WBPaper00041960:N2_fasting_upregulated_anytime
      WBPaper00042331:a-SWCNTs_downregulated
      WBPaper00045263:0.1mM-paraquat_downregulated
      WBPaper00045263:nuo-6(qm200)_downregulated
      WBPaper00047070:N2_starvation_upregulated
      WBPaper00047070:xpa-1_UV_upregulated
      WBPaper00048624:hlh-25(ok1710)_downregulated
      WBPaper00050407:hsp-6(RNAi)_downregulated
      [cgc6390]:herm_sex-enriched
  Map_info: Positive: Positive_clone: F56D5 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV 4.23651
  Method: Gene