WormBase Tree Display for Gene: WBGene00013608

WBGene00013608 SMap: S_parent: Sequence: Y102A5B
  Identity: Version: 2
    Name: CGC_name: clec-35 Person_evidence: WBPerson655
      Sequence_name: Y102A5B.2
      Molecular_name (6)
      Other_name: CELE_Y102A5B.2 Accession_evidence: NDB BX284605
      Public_name: clec-35
    DB_info: Database: AceView gene 5R332
        WormQTL gene WBGene00013608
        WormFlux gene WBGene00013608
        NDB locus_tag CELE_Y102A5B.2
        Panther gene CAEEL|WormBase=WBGene00013608|UniProtKB=H2KMJ0
          family PTHR22991
        NCBI gene 190827
        RefSeq protein NM_001269799.1
            NM_001269798.2
        TREEFAM TREEFAM_ID TF351663
        TrEMBL UniProtAcc Q9XXJ5
            H2KMJ0
        UniProt_GCRP UniProtAcc H2KMJ0
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:55 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 29 Apr 2005 13:53:46 WBPerson2970 Name_change: CGC_name: clec-35
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: clec
    Allele (107)
    RNASeq_FPKM (74)
    GO_annotation: 00021350
    Ortholog (36)
    Paralog (52)
    Structured_description: Automated_description: Predicted to be located in membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y102A5B.2a
      Y102A5B.2b
    Corresponding_CDS_history: Y102A5B.2:wp109
    Corresponding_transcript: Y102A5B.2a.1
      Y102A5B.2b.1
  Experimental_info: RNAi_result: WBRNAi00036446 Inferred_automatically: RNAi_primary
      WBRNAi00019791 Inferred_automatically: RNAi_primary
      WBRNAi00055126 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1015849
      Expr1158661
      Expr2010167
      Expr2028409
    Microarray_results (16)
    Expression_cluster: WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:intestine_larva_enriched
      WBPaper00037950:intestine_larva_SelectivelyEnriched
      WBPaper00038061:aldicarb_downregulated
      WBPaper00038438:D.coniospora_12hr_upregulated_RNAseq
      WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
      WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
      WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
      WBPaper00040560:hpl-2_embryo_downregulated
      WBPaper00042561:smg-2(RNAi)_upregulated
      WBPaper00042561:smgl-1(RNAi)_upregulated
      WBPaper00044030:nhr-8(hd117)_upregulated
      WBPaper00048971:daf-16(mgDf50)_upregulated_L1
      WBPaper00049334:CE_intestine_enriched
      WBPaper00049377:MWCNT_downregulated
      WBPaper00049498:npr-1(ur89)_regulated_1
      WBPaper00049545:jmjd-3.1(+)_upregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050990:intestine_expressed
      WBPaper00051039:intestine_enriched
      WBPaper00051137:N.parisii-virus_upregulated_N2
      WBPaper00053606:elt-2(ca15)_vs_elt-2(ca15);elt-7(tm840)_doenregulated
      WBPaper00053606:N2_vs_elt-2(ca15)_upregulated
      WBPaper00055386:daf-2(e1370)_downregulated
      WBPaper00055386:eat-2(ad465)_upregulated
      WBPaper00055971:nhl-2(ok818)_20C_downregulated
      WBPaper00055971:nhl-2(ok818)_25C_downregulated
      WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
      WBPaper00056167:Cry5B_downregulated
      WBPaper00056167:ifo-1(kc2)_downregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00056809:smn-1(ok355)_upregulated
      WBPaper00057347:nhr-14(tm1473)_upreglated
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00058711:paraquat_downregulated
      WBPaper00058948:PA14_downregulated
      WBPaper00058969:RIS_depleted
      WBPaper00059117:B.subtilis_upregulated
      WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
      WBPaper00060445:nfki-1(cer1)_upregulated_L1
      WBPaper00060764:swsn-1(os22ts)_upregulated
      WBPaper00060911:prx-5(RNAi)_upregulated_mRNA
      WBPaper00061040:eat-2(ad1116)_upregulated
      WBPaper00061081:E.faecalis_upregulated_skpo-1(ok1640)
      WBPaper00061424:Diet_MYb120_upregulated
      WBPaper00061527:176662_at-Y53F4B.16
      WBPaper00061530:nhr-49(e2144)_upregulated
      WBPaper00061653:alh-4(hj221)_downregulated
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062446:nhr-8(hd117)_upregulated
      WBPaper00064156:lipl-4(overexpress)_upregulated
      WBPaper00064637:cox-5B(RNAi)_upregulated
      WBPaper00064661:lpd-3(ok2138)_upregulated
      WBPaper00065029:cadmium_upregulated
      WBPaper00065086:JU1400_N.ferruginous_regulated
      WBPaper00065086:JU1400_N.ironsii_regulated
      WBPaper00065086:JU1400_N.parisii_regulated
      WBPaper00065096:npr-8(ok1439)_upregulated_Day1_20C
      WBPaper00065158:25C_vs_15C_downregulated_WholeAnimal
      WBPaper00065734:unc-25(e156)_upregulated
      WBPaper00065984:pals-17(syb3980)_upregulated
      cgc4489_group_2
      WBPaper00026980:intestine_enriched
      WBPaper00055899:nitroguanidine_regulated
    Interaction: WBInteraction000312457
  Map_info: Map: V Position: 11.2347 Error: 0.000438
    Positive: Positive_clone: Y102A5B Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00062913
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene