WormBase Tree Display for Gene: WBGene00012265

WBGene00012265 SMap: S_parent: Sequence: W04G5
  Identity: Version: 1
    Name: Sequence_name: W04G5.4
      Molecular_name: W04G5.4
        W04G5.4.1
        CE53981
      Other_name: CELE_W04G5.4 Accession_evidence: NDB BX284601
      Public_name: W04G5.4
    DB_info: Database: AceView gene 1M221
        WormQTL gene WBGene00012265
        WormFlux gene WBGene00012265
        NDB locus_tag CELE_W04G5.4
        Panther gene CAEEL|WormBase=WBGene00012265|UniProtKB=O18169
          family PTHR12143
        NCBI gene 189200
        RefSeq protein NM_001377637.2
        TREEFAM TREEFAM_ID TF322613
        TrEMBL UniProtAcc O18169
        UniProt_GCRP UniProtAcc O18169
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (31)
    RNASeq_FPKM (74)
    GO_annotation: 00031493
      00031494
      00031495
      00031496
      00031497
      00031498
      00119406
      00119407
    Ortholog (12)
    Paralog (19)
    Structured_description: Automated_description: Predicted to enable peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity. Predicted to be involved in glycoprotein catabolic process and protein quality control for misfolded or incompletely synthesized proteins. Predicted to be located in cytosol and nucleus. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: W04G5.4
    Corresponding_CDS_history: W04G5.4:wp180
      W04G5.4:wp274
    Corresponding_transcript: W04G5.4.1
    Associated_feature: WBsf985348
      WBsf985349
      WBsf1010755
      WBsf1010756
  Experimental_info: RNAi_result: WBRNAi00004426 Inferred_automatically: RNAi_primary
      WBRNAi00076737 Inferred_automatically: RNAi_primary
      WBRNAi00054792 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1011183
      Expr1158333
      Expr2006785
      Expr2025009
    Drives_construct: WBCnstr00030039
    Construct_product: WBCnstr00030039
    Microarray_results (18)
    Expression_cluster: WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
      WBPaper00050370:dpy-21(e428)_L3_upregulated
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00053321:mes-4(RNAi)_upregulated_fed-L1_Truseq
      WBPaper00055354:Rapamycin-Rifampicin_upregulated
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00058969:RIS_depleted
      WBPaper00059027:neuron-synapses_depleted
      WBPaper00061340:hmc
      WBPaper00061340:Pharyngeal_marginal_cell
      WBPaper00061424:Diet_MYb120_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
      WBPaper00061527:sre-33-ZK1025.1_8337
      WBPaper00061651:hmc_enriched
      WBPaper00062197:TRN_depleted
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00065623:103
      WBPaper00065841:1_2
      WBPaper00065841:110_0
      WBPaper00065841:110_1
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      WBPaper00028789:pmk-1_downregulated
      WBPaper00030985:Enterococcus_faecalis_downregulated
      WBPaper00045294:50uM_DBAA_downregulated
    Interaction (28)
  Map_info: Positive: Positive_clone: W04G5 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I 9.36376
  Method: Gene