WormBase Tree Display for Gene: WBGene00011634

WBGene00011634 SMap: S_parent: Sequence: T09A5
  Identity: Version: 1
    Name: Sequence_name: T09A5.5
      Molecular_name: T09A5.5
        T09A5.5.1
        CE01086
      Other_name: CELE_T09A5.5 Accession_evidence: NDB BX284602
      Public_name: T09A5.5
    DB_info: Database: AceView gene 2I142
        WormQTL gene WBGene00011634
        WormFlux gene WBGene00011634
        NDB locus_tag CELE_T09A5.5
        NCBI gene 174263
        RefSeq protein NM_063248.6
        SwissProt UniProtAcc P45965
        UniProt_GCRP UniProtAcc P45965
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (13)
    RNASeq_FPKM (74)
    GO_annotation: 00046166
    Contained_in_operon: CEOP2312
    Ortholog (26)
    Structured_description: Automated_description: Located in mitochondrion. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T09A5.5
    Corresponding_transcript: T09A5.5.1
    Other_sequence (29)
    Associated_feature: WBsf223402
      WBsf223403
  Experimental_info: RNAi_result: WBRNAi00110744 Inferred_automatically: RNAi_primary
      WBRNAi00071168 Inferred_automatically: RNAi_primary
      WBRNAi00026248 Inferred_automatically: RNAi_primary
      WBRNAi00116205 Inferred_automatically: RNAi_primary
      WBRNAi00035376 Inferred_automatically: RNAi_primary
      WBRNAi00116223 Inferred_automatically: RNAi_primary
      WBRNAi00009143 Inferred_automatically: RNAi_primary
      WBRNAi00071782 Inferred_automatically: RNAi_primary
      WBRNAi00081165 Inferred_automatically: RNAi_primary
      WBRNAi00052923 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr9531
      Expr1023991
      Expr1035122
      Expr1156525
      Expr2006026
      Expr2024241
    Drives_construct: WBCnstr00030514
    Construct_product (2)
    Microarray_results (19)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00032528:L3_enriched
      WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00035073:mitochondria_protein
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045050:csr-1(hypomorph)_upregulated
      WBPaper00045521:Gender_Neutral
      WBPaper00045571:germline-ablation_downregulated
      WBPaper00045974:NSM_enriched_totalRNA_RNAseq
      WBPaper00046509:lin-35(n745)_downregulated
      WBPaper00048910:mRNA-interacting_protein
      WBPaper00048988:neuron_expressed
      WBPaper00049545:cco-1(RNAi)_downregulated
      WBPaper00049545:jmjd-3.1(+)_downregulated
      WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
      WBPaper00049942:hsf-1(RNAi)_downregulated
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00050990:pharynx_expressed
      WBPaper00051039:germline_enriched
      WBPaper00052884:emb-4(hc60)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053388:dauer_regulated_Cluster6
      WBPaper00053810:daf-2(e1370)_downregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00055354:Psora-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Metformin_upregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055482:pmt-2(RNAi)_downregulated
      WBPaper00055648:germline_expressed
      WBPaper00055827:daf-2(e1370)_downregulated
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056809:smn-1(ok355)_downregulated
      WBPaper00057158:mdt-15(tm2182)_dependent_15C_downregulated
      WBPaper00057288:iff-1(RNAi)_downregulated_transcript
      WBPaper00058691:sin-3(tm1276)_downregulated
      WBPaper00060100:SiNP_downregulated_mRNA
      WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00061341:28C_24h_downregulated
      WBPaper00061341:28C_48h_downregulated
      WBPaper00061527:mrpl-54-lbp-4
      WBPaper00062325:muscle_enriched_coding-RNA
      WBPaper00064071:NHR-49_interacting
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064315:mes-4(bn73)_downregulated_EGCs
      WBPaper00064716:paraquat_upregulated
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
      cgc4489_group_4
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00031003:hlh_1_enriched
      WBPaper00032165:differentially_expressed_with_age_medoid_7
      WBPaper00035905:FBF-1_Associated
      WBPaper00038231:Cry5B_1.5-fold_downregulated
      WBPaper00038231:Cry5B_2-fold_downregulated
      WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2down
      WBPaper00041606:CE_S.marcescens_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      [cgc5376]:let-60(G12V)-regulated_genes
      [cgc5767]:cluster_14
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_E_pi(122_min)
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_MD
      [cgc5767]:expression_class_MDE
      [cgc5767]:expression_class_MD_pd(23_min)
      [cgc5767]:expression_class_ME
    Interaction (24)
  Map_info: Positive: Positive_clone: T09A5 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II 0.585737
  Reference: WBPaper00034662
    WBPaper00038444
    WBPaper00049828
  Method: Gene