WormBase Tree Display for Gene: WBGene00011249

WBGene00011249 SMap: S_parent: Sequence: R11G10
  Identity: Version: 2
    Name: CGC_name: semi-1 Person_evidence: WBPerson3185
      Sequence_name: R11G10.2
      Molecular_name: R11G10.2
        R11G10.2.1
        CE51824
      Other_name: CELE_R11G10.2 Accession_evidence: NDB BX284605
      Public_name: semi-1
    DB_info: Database: AceView gene 5N988
        WormQTL gene WBGene00011249
        WormFlux gene WBGene00011249
        NDB locus_tag CELE_R11G10.2
        Panther gene CAEEL|WormBase=WBGene00011249|UniProtKB=Q21950
          family PTHR23300
        NCBI gene 187819
        RefSeq protein NM_073950.6
        SwissProt UniProtAcc Q21950
        TREEFAM TREEFAM_ID TF315241
        UniProt_GCRP UniProtAcc Q21950
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 17 Jun 2022 20:36:35 WBPerson21950 Name_change: CGC_name: semi-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: semi
    Allele (94)
    RNASeq_FPKM (74)
    GO_annotation: 00073444
      00073445
      00073446
      00118508
    Ortholog (30)
    Paralog: WBGene00012538 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable selenium binding activity. Human ortholog(s) of this gene implicated in glaucoma. Is an ortholog of human SELENBP1 (selenium binding protein 1). Paper_evidence: WBPaper00065943
          Curator_confirmed (2)
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:1686 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:10719)
  Molecular_info: Corresponding_CDS: R11G10.2
    Corresponding_CDS_history: R11G10.2:wp225
      R11G10.2:wp256
    Corresponding_transcript: R11G10.2.1
  Experimental_info: RNAi_result: WBRNAi00103485 Inferred_automatically: RNAi_primary
      WBRNAi00017763 Inferred_automatically: RNAi_primary
      WBRNAi00051805 Inferred_automatically: RNAi_primary
      WBRNAi00034867 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1026114
      Expr1155466
      Expr2005596
    Microarray_results (22)
    Expression_cluster: WBPaper00032528:L3_depleted
      WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00038438:D.coniospora_12hr_upregulated_RNAseq
      WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
      WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
      WBPaper00038438:S.marcescens_24hr_downregulated_RNAseq
      WBPaper00043951:insoluble_protein_day16_N2
      WBPaper00044128:DietaryRestriction_downregulated
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00045520:V.alginolyticus_downregulated
      WBPaper00048988:neuron_expressed
      WBPaper00049377:MWCNT_upregulated
      WBPaper00050726:starvation_regulated_LowSalt
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Psora-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Metformin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin_downregulated
      WBPaper00055354:Rifampicin-Allantoin_downregulated
      WBPaper00059117:B.subtilis_upregulated
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00061081:E.faecalis_upregulated_N2
      WBPaper00061340:AFD
      WBPaper00061340:AWA
      WBPaper00061424:Diet_MYb120_upregulated
      WBPaper00061424:Diet_MYb131_upregulated
      WBPaper00061527:srj-42-srw-113
      WBPaper00062103:neuron_enriched
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062585:hlh-26(ok1453)_downregulated_E.faecium
      WBPaper00065158:AFD_enriched
      WBPaper00065746:eat-2(ad1113)_upregulated
      WBPaper00065841:17_0
      WBPaper00065841:35_0
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00026929:Resveratrol_regulated_daf-16
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00036123:Atrazine_regulated
      WBPaper00040858:eQTL_age_regulated_aging
      WBPaper00040858:eQTL_regulated_old
      WBPaper00044091:Bpseudomallei_repressed_12h
      WBPaper00045807:microcystin-LR_downregulated
    Interaction: WBInteraction000306966
  Map_info: Positive: Positive_clone: R11G10 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V 5.40268
  Reference: WBPaper00038491
    WBPaper00055090
  Method: Gene