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WormBase Tree Display for Gene: WBGene00011153

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Name Class

WBGene00011153SMapS_parentSequenceR09A8
IdentityVersion1
NameSequence_nameR09A8.2
Molecular_nameR09A8.2
R09A8.2.1
CE53059
Other_nameCELE_R09A8.2Accession_evidenceNDBBX284606
Public_nameR09A8.2
DB_infoDatabaseAceViewgeneXN239
WormQTLgeneWBGene00011153
WormFluxgeneWBGene00011153
NDBlocus_tagCELE_R09A8.2
PanthergeneCAEEL|WormBase=WBGene00011153|UniProtKB=Q21853
familyPTHR22880
NCBIgene181409
RefSeqproteinNM_001373539.2
TREEFAMTREEFAM_IDTF353171
TrEMBLUniProtAccQ21853
UniProt_GCRPUniProtAccQ21853
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:52WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (73)
RNASeq_FPKM (74)
GO_annotation00073126
00073127
00073128
00073129
00073130
Contained_in_operonCEOPX153
OrthologchrX_pilon.g20290Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00011152Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00011993Caenorhabditis elegansFrom_analysisTreeFam
WBGene00017177Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable lysine-acetylated histone binding activity. Predicted to be involved in chromatin remodeling and regulation of DNA-templated transcription. Predicted to be located in nucleus. Predicted to be part of chromatin.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSR09A8.2
Corresponding_CDS_historyR09A8.2:wp101
R09A8.2:wp270
Corresponding_transcriptR09A8.2.1
Associated_featureWBsf236499
Experimental_infoRNAi_resultWBRNAi00061864Inferred_automaticallyRNAi_primary
WBRNAi00034760Inferred_automaticallyRNAi_primary
WBRNAi00017620Inferred_automaticallyRNAi_primary
WBRNAi00051583Inferred_automaticallyRNAi_primary
Expr_patternExpr1010770
Expr1034906
Expr1155255
Expr2005506
Expr2023725
Drives_constructWBCnstr00030889
Construct_productWBCnstr00030889
Microarray_results (16)
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00033065:cyc-1(RNAi)_downregulated
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00044037:eat-2_downregulated
WBPaper00044501:gld-1_let-7_regulated
WBPaper00044656:tatn-1(qd182)_downregulated
WBPaper00044760:germline_specific
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_downregulated
WBPaper00045521:Oogenic
WBPaper00045618:puf-8_downregulated
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00046691:AB_enriched
WBPaper00048988:neuron_expressed
WBPaper00049159:Microwave_upregulated_adult
WBPaper00049290:rsks-1(sv31)_upregulated
WBPaper00049498:npr-1(ur89)_regulated_6
WBPaper00049920:Glucose-Diet_downregulated_hyl-2(tm2031)
WBPaper00049920:Glucose-Diet_downregulated_N2
WBPaper00049954:BPA_downregulated
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00051039:germline_enriched
WBPaper00051265:F4_hrde-1(tm1200)_upregulated
WBPaper00051265:F4_morc-1(tm6048)_upregulated
WBPaper00051558:aging_regulated
WBPaper00052884:emb-4(hc60)_downregulated
WBPaper00053184:sma-2(rax5)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053302:alovudine_24h_regulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053321:embryo-to-L1_upregulated_nos-1(gv5)nos-2(RNAi)_SMARTseq
WBPaper00053321:lin-15B(RNAi)_downregulated_starved-L1_Truseq
WBPaper00053321:mes-2(RNAi)_upregulated_fed-L1_Truseq
WBPaper00053321:mes-4(RNAi)_upregulated_fed-L1_Truseq
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_fed-L1_Truseq
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_starved-L1_Truseq
WBPaper00053599:female_vs_male_upregulated
WBPaper00053599:mitosis_vs_meiosis_downregulated
WBPaper00053599:oocyte_vs_mitosis_downregulated
WBPaper00053810:daf-2(e1370)_downregulated
WBPaper00054191:H3.3(null)_L1_upregulated
WBPaper00054410:set-26(tm2467)_downregulated
WBPaper00054493:hpl-2(tm1489)_downregulated
WBPaper00055013:hmg-3(bar24)_upregulated
WBPaper00055334:DLC-1_interacting
WBPaper00055386:daf-2(e1370)_downregulated
WBPaper00055941:atfs-1(et15)_downregulated
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056034:pals-22(jy3)_downregulated
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_downregulated_N2
WBPaper00056161:hermaphrodite_enriched_siRNA
WBPaper00056167:Cry5B_upregulated
WBPaper00056169:rrf-3(pk1426)_upregulated_L4
WBPaper00056330:glycine_upregulated
WBPaper00056809:smn-1(ok355)_upregulated
WBPaper00057041:spc-1(cas971)_upregulated
WBPaper00057083:daf-2(e1370)rsks-1(ok1255)_post-transcriptional_downregulated
WBPaper00057288:Cold_downregulated_transcript
WBPaper00057288:iff-1(RNAi)_downregulated_transcript
WBPaper00058598:mex-3(eu149)_downregulated
WBPaper00058598:sin-3(tm1276)_upregulated
WBPaper00058691:set-2(bn129)_downregulated
WBPaper00058691:sin-3(tm1276)_upregulated
WBPaper00058948:PA14_upregulated
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059664:srbc-48(ac23)_downregulated
WBPaper00059728:5ug_cholesterol_downregulated
WBPaper00059728:20ug_cholesterol_downregulated
WBPaper00060014:set-2(tm1630)_upregulated
WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060399:pqm-1(ok485)_downregulated_CoCl2_6hr
WBPaper00060445:ikb-1(nr2027)_upregulated_L4
WBPaper00060445:nfki-1(cer1)_downregulated_L1
WBPaper00060445:nfki-1(cer1)_upregulated_L4
WBPaper00060683:hlh-11(ko1)_downregulated
WBPaper00060909:atfs-1(cmh15)_upregulated
WBPaper00061007:S.aquatilis_downregulated
WBPaper00061081:E.faecalis_downregulated_N2
WBPaper00061081:E.faecalis_downregulated_skpo-1(ok1640)
WBPaper00061203:sin-3(tm1276)_downregulated
WBPaper00061203:spr-1(ok2144)_downregulated
WBPaper00061340:hyp3
WBPaper00061341:28C_48h_downregulated
WBPaper00061439:unc-30(ok613)_downregulated
WBPaper00061439:unc-30(ok613)_downregulated_P.aeruginosa-infection
WBPaper00061527:C17E7.4-T06D4.1
WBPaper00061613:human-amyloid-beta_alpha-Synuclein(A53T)_upregulated
WBPaper00061613:human-amyloid-beta_upregulated
WBPaper00061653:alh-4(hj221)_upregulated
WBPaper00062118:neural-HSF-1_upregulated
WBPaper00062146:MOG-7-degron_2h_regulated
WBPaper00062159:hda-2(ok1479)_downregulated
WBPaper00062193:hsf-1(RNAi)_downregulated
WBPaper00062193:skn-1(RNAi)_downregulated
WBPaper00062446:nhr-8(hd117)_downregulated
WBPaper00062456:doxycycline_downregulated_CB4856_transcript
WBPaper00062456:doxycycline_downregulated_N2_transcript
WBPaper00062585:hlh-26(ok1453)_downregulated_E.faecium
WBPaper00064229:B.thuringiensis-Cry5Ba_downregulated
WBPaper00064315:mes-3(bn199)_upregulated_EGCs
WBPaper00064315:mes-3(bn199)_upregulated_PGCs
WBPaper00064315:mes-4(bn73)_upregulated_EGCs
WBPaper00064315:mes-4(bn73)_upregulated_PGCs
WBPaper00064315:mrg-1(qa6200)_upregulated_PGCs
WBPaper00064716:paraquat_upregulated
WBPaper00064769:him-17(me24)_downregulated
WBPaper00064871:hypoxia_upregulated_F2
WBPaper00065074:glna(-)_upregulated
WBPaper00065096:25C_vs_20C_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065096:npr-8(ok1439)_upregulated_Day1_20C
WBPaper00065315:mating_upregulated_Day2-7
WBPaper00065975:P-body_vs_oocyte_enriched
WBPaper00065975:P-body_vs_WholeAnimal_enriched
WBPaper00065984:pals-17(syb3980)_upregulated
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066110:Doxorubicin_downregulated_diploid
WBPaper00066110:Doxorubicin_downregulated_tetraploid
WBPaper00066110:tetraploid_vs_diploid_downregulated
WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
WBPaper00025032:cluster_42
WBPaper00027111:rde-3(r459)_downregulated
WBPaper00029437:dcr-1_downregulated
WBPaper00032062:age_regulated_genes
WBPaper00035873:dpy-9_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00035873:osm-8_regulated
WBPaper00035873:osm-11_regulated
WBPaper00036130:mir-243_down_regulated
WBPaper00036286:Pattern_B
WBPaper00037695:DD_3-day
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_regulated_old
WBPaper00041002:HF_3d_2.0mM_Down
WBPaper00041002:HQ_3d_2.0mM_Down
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00042258:DA1877_downregulated_GravidAdult
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00045673:colistin_downregulated
WBPaper00048989:N2_rapamycin_downregulated
WBPaper00051387:Triclosan_downregulated
WBPaper00056330:mrps-5(RNAi)_downregulated
[cgc5767]:expression_class_M
[cgc5767]:expression_class_SM
[cgc6390]:Cluster_E
[cgc6390]:oogenesis-enriched
Interaction (22)
Map_infoPositivePositive_cloneR09A8Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionX7.258
MethodGene