WormBase Tree Display for Gene: WBGene00010103

WBGene00010103 SMap: S_parent: Sequence: F55C9
  Identity: Version: 1
    Name: Sequence_name: F55C9.6
      Molecular_name: F55C9.6
        F55C9.6.1
        CE18738
      Other_name: CELE_F55C9.6 Accession_evidence: NDB BX284605
      Public_name: F55C9.6
    DB_info: Database: AceView gene 5T766
        WormQTL gene WBGene00010103
        WormFlux gene WBGene00010103
        NDB locus_tag CELE_F55C9.6
        Panther gene CAEEL|WormBase=WBGene00010103|UniProtKB=Q9XUY8
          family PTHR47920
        NCBI gene 186294
        RefSeq protein NM_075354.1
        TrEMBL UniProtAcc Q9XUY8
        UniProt_GCRP UniProtAcc Q9XUY8
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (60)
    RNASeq_FPKM (74)
    Ortholog (45)
    Paralog (34)
    Structured_description: Automated_description: Is affected by several genes including eat-2; sir-2.1; and npr-1 based on microarray; tiling array; and RNA-seq studies. Is affected by ten chemicals including methylmercuric chloride; Rifampin; and allantoin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: CUB-like domain. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F55C9.6
    Corresponding_transcript: F55C9.6.1
    Other_sequence: DW718243.1
      MJC04141_1
      MH04311
      MC03294
      MA03163
      MPC01318_1
  Experimental_info: RNAi_result: WBRNAi00048487 Inferred_automatically: RNAi_primary
      WBRNAi00019941 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1024118
      Expr1034414
      Expr1152279
      Expr2022444
    Drives_construct: WBCnstr00031665
    Construct_product: WBCnstr00031665
    Microarray_results (17)
    Expression_cluster: WBPaper00033065:cyc-1(RNAi)_downregulated
      WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_downregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00040209:B.thuringiensis_upregulated_MY18
      WBPaper00040209:B.thuringiensis_upregulated_N2
      WBPaper00040560:hpl-2_embryo_upregulated
      WBPaper00042561:smg-2(RNAi)_upregulated
      WBPaper00044316:CH3HgCl_7.5uM_downregulated
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00049498:npr-1(ur89)_regulated_1
      WBPaper00050096:P.aeruginosa_upregulated
      WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_25C
      WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
      WBPaper00055226:adr-1(tm668)_upregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
      WBPaper00055354:Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rifampicin-Psora_downregulated
      WBPaper00058598:spn-4(tm291)_downregulated
      WBPaper00058691:cfp-1(tm6369)_upregulated
      WBPaper00058691:sin-3(tm1276)_upregulated
      WBPaper00058955:heatshock_upregulated_CE
      WBPaper00060014:set-2(zr2012)_upregulated
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
      WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061527:sre-33-ZK1025.1_8337
      WBPaper00061753:csr-1(tor159)_upregulated_25C
      WBPaper00064130:Beta-Amyloid_24h_downregulated_mRNA
      WBPaper00065096:Day10_vs_Day1_upregulated
      WBPaper00065096:npr-8(ok1439)_downregulated_Day10_20C
      cgc4489_group_21
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00030985:Serratia_marcesens_downregulated
      WBPaper00031850:mdt-15(RNAi)_upregulated
      WBPaper00036123:Atrazine_regulated
      WBPaper00036286:Pattern_I
      WBPaper00040210:Chlorpyrifos_24C_regulated
      WBPaper00041606:CE_S.marcescens_regulated
      WBPaper00045294:50uM_TBBP_upregulated
      WBPaper00046548:dafachronic-acid_downregulated
      WBPaper00048989:N2_rapamycin_downregulated
      WBPaper00055899:nitroguanidine_regulated
    Interaction (20)
  Map_info: Positive: Positive_clone: F55C9 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V 20.9158
  Method: Gene