WormBase Tree Display for Gene: WBGene00009881

WBGene00009881 SMap: S_parent: Sequence: F49C12
  Identity: Version: 2
    Name: Sequence_name: F49C12.12
      Molecular_name: F49C12.12a
        F49C12.12a.1
        CE03372
        F49C12.12b
        CE49660
        F49C12.12a.2
        F49C12.12b.1
      Other_name: phi-62 Person_evidence: WBPerson2582
        CELE_F49C12.12 Accession_evidence: NDB BX284604
      Public_name: F49C12.12
    DB_info: Database: AceView gene 4K84
        WormQTL gene WBGene00009881
        WormFlux gene WBGene00009881
        NDB locus_tag CELE_F49C12.12
        Panther gene CAEEL|WormBase=WBGene00009881|UniProtKB=Q20589
          family PTHR31733
        NCBI gene 177755
        RefSeq protein NM_001307112.3
            NM_069234.7
        TrEMBL UniProtAcc Q20589
            X5LX67
        UniProt_GCRP UniProtAcc Q20589
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:50 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 17 Mar 2005 13:54:35 WBPerson2970 Name_change: Other_name: phi-62
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (14)
    RNASeq_FPKM (74)
    GO_annotation: 00068467
      00068468
      00068469
      00117437
      00117438
    Ortholog (35)
    Paralog: WBGene00016721 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Automated_description: Predicted to enable RNA endonuclease activity. Predicted to be involved in nucleic acid phosphodiester bond hydrolysis. Predicted to be located in membrane. Is an ortholog of human RNASEK (ribonuclease K). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info (4)
  Experimental_info: RNAi_result (21)
    Expr_pattern: Expr1018536
      Expr1034308
      Expr1151633
      Expr2003909
      Expr2022131
    Drives_construct: WBCnstr00031848
    Construct_product: WBCnstr00031848
    Microarray_results (22)
    Expression_cluster: WBPaper00032528:L3_enriched
      WBPaper00037055:DAF-16_binding_DNA
      WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:CEP-sheath-cells_adult_enriched
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044501:gld-1_let-7_regulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045521:Gender_Neutral
      WBPaper00048988:neuron_expressed
      WBPaper00049942:hsf-1(RNAi)_downregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00050990:pharynx_expressed
      WBPaper00050990:seam_expressed
      WBPaper00051039:germline_enriched
      WBPaper00053388:dauer_regulated_Cluster4
      WBPaper00053713:Pheromone-induced_postdauer_vs_control_downregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Rapamycin-Allantoin_downregulated
      WBPaper00056139:gut-microbiota_upregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00058725:sftb-1(cer6)_downregulated
      WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
      WBPaper00059356:BAZ-2_SET-6_interacting
      WBPaper00059816:crh-1(n3315)_downrgulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00061340:AMsh
      WBPaper00061340:Excretory_cell
      WBPaper00061341:28C_48h_downregulated
      WBPaper00061439:unc-30(ok613)_upregulated
      WBPaper00061466:nath-10(icb99)_downregulated
      WBPaper00061466:nath-10(icb102)_downregulated
      WBPaper00061527:arf-1.2_3224-trap-2_2175
      WBPaper00061651:AIZ_enriched
      WBPaper00061651:Excretory_cell_enriched
      WBPaper00061651:PVW_enriched
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062669:extracellular-vesicle_protein
      WBPaper00064071:NHR-49_interacting
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00065120:body-muscle-transcriptome
      WBPaper00066085:sin-3(syb2172)_downregulated
      cgc4386_cluster_4_6
      cgc4489_group_2
      WBPaper00005124:estrogen_10-5M_regulated
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00030985:Serratia_marcesens_upregulated
      WBPaper00031003:0hr_muscle_depleted
      WBPaper00031003:total_muscle_depleted
      WBPaper00031252:AIN-1_IP_enriched
      WBPaper00034739:N2lessDR1350
      WBPaper00035479:daf-16(RNAi)_upregulated
      WBPaper00035905:FBF-1_Associated
      WBPaper00036123:Fluoranthene_regulated
      WBPaper00036286:Pattern_I
      WBPaper00037611:RNP-8-associated
      WBPaper00040963:TA300_up
      WBPaper00041606:CE_B.thuringiensis-DB27_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00045263:0.1mM-paraquat_downregulated
      WBPaper00048624:hlh-25(ok1710)_upregulated
      [cgc5767]:cluster_14
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_E_pi(122_min)
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_MD
      [cgc5767]:expression_class_MDE
      [cgc5767]:expression_class_MD_pd(23_min)
      [cgc5767]:expression_class_ME
    Interaction: WBInteraction000235855
      WBInteraction000249498
      WBInteraction000409492
      WBInteraction000416162
      WBInteraction000427112
      WBInteraction000438896
      WBInteraction000502510
  Map_info: Positive: Positive_clone: F49C12 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV 4.16646
  Reference: WBPaper00035228
    WBPaper00038491
    WBPaper00040412
    WBPaper00055090
  Method: Gene