WormBase Tree Display for Gene: WBGene00009521

WBGene00009521 SMap: S_parent: Sequence: CHROMOSOME_IV
  Identity: Version: 2
    Name: Sequence_name: F38A1.8
      Molecular_name: F38A1.8
        F38A1.8.1
        CE41537
      Other_name: CELE_F38A1.8 Accession_evidence: NDB BX284604
      Public_name: F38A1.8
    DB_info: Database: AceView gene 4B988
        WormQTL gene WBGene00009521
        WormFlux gene WBGene00009521
        NDB locus_tag CELE_F38A1.8
        Panther gene CAEEL|WormBase=WBGene00009521|UniProtKB=G4RYA5
          family PTHR43134
        NCBI gene 185438
        RefSeq protein NM_171254.7
        TREEFAM TREEFAM_ID TF106189
        TrEMBL UniProtAcc G4RYA5
        UniProt_GCRP UniProtAcc G4RYA5
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:50 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 06 Sep 2007 16:52:43 WBPerson1849 Event: Acquires_merge: WBGene00021119
      Acquires_merge: WBGene00021119
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (206)
    Strain: WBStrain00003039
    RNASeq_FPKM (74)
    GO_annotation (15)
    Ortholog (37)
    Paralog: WBGene00009012 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable GTPase activity and signal recognition particle binding activity. Predicted to be involved in protein targeting to ER. Predicted to be located in endoplasmic reticulum membrane. Predicted to be part of signal recognition particle receptor complex. Is an ortholog of human SRPRA (SRP receptor subunit alpha). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F38A1.8
    Corresponding_CDS_history: F38A1.8:wp181
    Corresponding_transcript: F38A1.8.1
    Other_sequence (28)
    Associated_feature: WBsf651644
      WBsf667737
      WBsf667738
      WBsf229752
      WBsf229753
  Experimental_info: RNAi_result (13)
    Expr_pattern (7)
    Drives_construct: WBCnstr00003539
    Microarray_results (32)
    Expression_cluster: WBPaper00029359_1280
      WBPaper00029359_1444
      WBPaper00029359_1504
      WBPaper00029359_1578
      WBPaper00029359_1604
      WBPaper00033070:Rhine_downregulated
      WBPaper00037946:EGL-5_interacting
      WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00038438:D.coniospora_12hr_upregulated_RNAseq
      WBPaper00044501:gld-1_let-7_regulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00045521:Spermatogenic
      WBPaper00045774:clk-1_downregulated
      WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
      WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
      WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
      WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
      WBPaper00048988:neuron_expressed
      WBPaper00049498:npr-1(ur89)_regulated_8
      WBPaper00049545:cco-1(RNAi)_upregulated
      WBPaper00049545:jmjd-3.1(+)_upregulated
      WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
      WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
      WBPaper00049920:Glucose-Diet_downregulated_hyl-2(tm2031)
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051245:body-wall-muscle_cytoplasm_expressed
      WBPaper00051245:cytoplasm_specific
      WBPaper00051245:epidermis_cytoplasm_expressed
      WBPaper00051245:epidermis_nucleus_expressed
      WBPaper00051245:intestine_cytoplasm_expressed
      WBPaper00051245:pharyngeal-muscle_cytoplasm_expressed
      WBPaper00052884:emb-4(hc60)_downregulated
      WBPaper00053289:DREAM-target
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053321:embryo-to-L1_downregulated_nos-1(gv5)nos-2(RNAi)_SMARTseq
      WBPaper00053321:nos-1(gv5)nos-2(RNAi)_downregulated_L1_SMARTseq
      WBPaper00053388:dauer_regulated_Cluster1
      WBPaper00053599:female_vs_male_downregulated
      WBPaper00053599:oocyte_vs_mitosis_upregulated
      WBPaper00053810:daf-2(e1370)_downregulated
      WBPaper00053810:isp-1(qm150)_downregulated
      WBPaper00053810:nuo-6(qm200)_downregulated
      WBPaper00055226:ADR-2_target_N2
      WBPaper00055334:DLC-1_interacting
      WBPaper00055565:AVK_enriched
      WBPaper00055648:germline_expressed
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
      WBPaper00057288:iff-1(RNAi)_downregulated_transcript
      WBPaper00058691:cfp-1(tm6369)_downregulated
      WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
      WBPaper00059598:HeatShock_upregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00061340:K_Kprime
      WBPaper00061340:mc3
      WBPaper00061340:Parents_of_U_F_B_DVA
      WBPaper00061340:Parents_of_Y_DA6_DA7_DA9
      WBPaper00061340:Parent_of_PVP_and_rect_V
      WBPaper00061340:Pharyngeal_marginal_cell
      WBPaper00061478:SUMO-conjugated_protein
      WBPaper00061527:tub-2_4713-daf-2_5288
      WBPaper00061753:csr-1(tor159)_upregulated_25C
      WBPaper00062669:extracellular-vesicle_protein
      WBPaper00064064:DAF-15_interacting
      WBPaper00064071:NHR-49_interacting
      WBPaper00065120:body-muscle-transcriptome
      WBPaper00066062:xrep-4(lax137)_upregulated
      cgc4489_group_15
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00035560:ahr-1_downregulated
      WBPaper00036123:Atrazine_regulated
      WBPaper00036123:Cadmium_regulated
      WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2down
      WBPaper00040210:Chlorpyrifos_16C_regulated
      WBPaper00041174:environmental
      WBPaper00041174:genotypic
      WBPaper00041174:genotypic_and_environmental
      WBPaper00046853:AOBr_M.aeruginosa-batch-culture_upregulated
      [cgc5376]:let-60(G12V)-regulated_genes
    Interaction (101)
  Map_info: Positive: Positive_clone: F38A1 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV -21.0193
  Reference: WBPaper00032502
    WBPaper00038491
    WBPaper00055090
    WBPaper00058870
    WBPaper00064064
  Method: Gene