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WormBase Tree Display for Gene: WBGene00009054

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Name Class

WBGene00009054SMapS_parentSequenceF22D6
IdentityVersion1
NameSequence_nameF22D6.9
Molecular_nameF22D6.9
F22D6.9.1
CE24913
Other_nameCELE_F22D6.9Accession_evidenceNDBBX284601
Public_nameF22D6.9
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:49WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (16)
RNASeq_FPKM (74)
GO_annotation (8)
Ortholog (41)
Paralog (45)
Structured_descriptionAutomated_descriptionPredicted to enable protein serine/threonine phosphatase activity. Predicted to be located in cytoplasm and nucleus.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF22D6.9
Corresponding_transcriptF22D6.9.1
Other_sequenceTcol_isotig13883
JI215054.1
EX540082.1
AS16293
JI170142.1
JO469953.1
ASC19159_1
Associated_featureWBsf643424
WBsf656487
WBsf981039
WBsf1010032
WBsf217948
Experimental_infoRNAi_resultWBRNAi00003430Inferred_automaticallyRNAi_primary
WBRNAi00031277Inferred_automaticallyRNAi_primary
WBRNAi00066572Inferred_automaticallyRNAi_primary
WBRNAi00045321Inferred_automaticallyRNAi_primary
Expr_patternExpr1015585
Expr1033949
Expr1149245
Expr2002862
Expr2021079
Drives_constructWBCnstr00032495
Construct_productWBCnstr00032495
Microarray_results (17)
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:AVA-neuron_embryo_enriched
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:bodywall-muscle_larva_enriched
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038168:lin-15B(n744)_upregulated
WBPaper00040560:hpl-2_embryo_upregulated
WBPaper00040560:hpl-2_L3_upregulated
WBPaper00041071:spe-44_downregulated
WBPaper00042561:smg-2(RNAi)_upregulated
WBPaper00044316:CH3HgCl_7.5uM_upregulated
WBPaper00044736:rising_dev_expression
WBPaper00044760:germline_specific
WBPaper00045314:S.aureus-induced_hlh-30(tm1978)
WBPaper00045521:Spermatogenic
WBPaper00045729:gld-2(RNAi)_upregulated
WBPaper00045774:clk-1_upregulated
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_12h
WBPaper00048611:MnCl2_downregulated
WBPaper00048926:miaserin_upregulated_adult-day5
WBPaper00048988:neuron_expressed
WBPaper00049498:npr-1(ur89)_regulated_8
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00049942:hsf-1(RNAi)_downregulated
WBPaper00050163:chd-3(eh4)_downregulated_24-cell-embryo
WBPaper00050193:lsm-1(tm3585)_upregulated_L3
WBPaper00050193:met-2(n4256)set-25(n5021)_upregulated_L1
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050522:mafr-1(tm6082)_downregulated
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050743:elli-1(sam-3)_upregulated
WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00051039:germline_enriched
WBPaper00051558:aging_regulated
WBPaper00052884:emb-4(hc60)_downregulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053308:SMG-2_associated_NMD(-)_upregulated_ClassI
WBPaper00053321:embryo-to-L1_upregulated_nos-1(gv5)nos-2(RNAi)_SMARTseq
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_downregulated_L1_SMARTseq
WBPaper00053321:PGCs_enriched_NuGen
WBPaper00053599:female_vs_male_downregulated
WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_upregulated
WBPaper00053606:N2_vs_elt-2(ca15)_upregulated
WBPaper00055354:Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Metformin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin_upregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055354:Rifampicin-Psora_upregulated
WBPaper00055565:AVK_enriched
WBPaper00055648:sperm_expressed
WBPaper00055827:daf-2(e1370)_upregulated
WBPaper00055827:pfd-6(gk493446)_upregulated
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00056161:male_enriched_siRNA
WBPaper00057041:spc-1(cas971)_upregulated
WBPaper00057288:Cold_upregulated_transcript
WBPaper00057288:iff-1(RNAi)_upregulated_transcript
WBPaper00058691:set-2(bn129)_downregulated
WBPaper00059356:BAZ-2_SET-6_interacting
WBPaper00059739:hira-1(gk835598)_upregulated_L1
WBPaper00060100:SiNP_downregulated_mRNA
WBPaper00060278:atp-2(RNAi)_upregulated
WBPaper00060445:nfki-1(cer1)_ikb-1(nr2027)_upregulated_L4
WBPaper00060445:nfki-1(cer1)_upregulated_L4
WBPaper00060661:sensory-neuron_depleted
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060886:met-2(n4256)_upregulated
WBPaper00060886:spr-5(by101);met-2(n4256)_upregulated
WBPaper00060909:atfs-1(cmh15)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061439:unc-30(ok613)_downregulated
WBPaper00061439:unc-30(ok613)_downregulated_P.aeruginosa-infection
WBPaper00061527:172183_at-176110_at
WBPaper00061527:R05H5.4-F22D6.9_20949
WBPaper00062056:met-2(n4256)_upregulated
WBPaper00062156:jmjd-5(zr1234)_downregulated_germline
WBPaper00062193:skn-1(RNAi)_downregulated
WBPaper00062520:qui-1(db104)_downregulated
WBPaper00062590:Aging_downregulated_body-wall-muscle
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064107:lin-35(n745)_upregulated
WBPaper00064107:lin-52(3A)_vs_lin-52(WT)_upregulated
WBPaper00064315:mrg-1(qa6200)_downregulated_PGCs
WBPaper00065158:AFD_enriched
WBPaper00065984:pals-17(syb3980)_upregulated
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066110:Doxorubicin_upregulated_diploid
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
cgc4489_group_11
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Enriched_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00030839:Embryo_A_Class
WBPaper00030985:Serratia_marcesens_upregulated
WBPaper00031532:Larva_Pan_Neuronal_Enriched
WBPaper00035905:FBF-1_Associated
WBPaper00036123:Atrazine_regulated
WBPaper00036286:Pattern_H
WBPaper00036429:glp-1(oz112)_upregulated
WBPaper00037147:heatshock_upregulated
WBPaper00038427:lin-54_embryo_changed
WBPaper00040963:Q100_up
WBPaper00040963:Q200_up
WBPaper00040963:TA300_up
WBPaper00041174:environmental
WBPaper00041174:genotypic
WBPaper00041174:genotypic_and_environmental
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00045263:0.1mM-paraquat_downregulated
WBPaper00047070:xpa-1_UV_upregulated
WBPaper00053688:E.faecalis_upregulated
WBPaper00053688:E.faecium_upregulated
[cgc6390]:Cluster_D
[cgc6390]:spermatogenesis-enriched
InteractionWBInteraction000142922
WBInteraction000247158
WBInteraction000258529
WBInteraction000319375
WBInteraction000364572
WBInteraction000379676
WBInteraction000392108
WBInteraction000424226
WBInteraction000503142
WBInteraction000543479
Map_infoPositivePositive_cloneF22D6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionI1.73795
MethodGene