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WormBase Tree Display for Gene: WBGene00008616

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Name Class

WBGene00008616SMapS_parentSequenceF09C6
IdentityVersion2
Name (5)
DB_infoDatabaseAceViewgene5R373
WormQTLgeneWBGene00008616
WormFluxgeneWBGene00008616
NDBlocus_tagCELE_F09C6.2
PanthergeneCAEEL|WormBase=WBGene00008616|UniProtKB=O45329
familyPTHR23015
NCBIgene184231
RefSeqproteinNM_074866.3
TREEFAMTREEFAM_IDTF322360
TrEMBLUniProtAccO45329
UniProt_GCRPUniProtAccO45329
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:49WBPerson1971EventImportedInitial conversion from CDS class of WS125
212 Dec 2005 15:18:56WBPerson2970Name_changeCGC_namefbxa-44
StatusLive
Gene_info (7)
Molecular_infoCorresponding_CDSF09C6.2
Corresponding_CDS_historyF09C6.2:wp141
Corresponding_transcriptF09C6.2.1
Experimental_infoRNAi_resultWBRNAi00012959Inferred_automaticallyRNAi_primary
WBRNAi00044097Inferred_automaticallyRNAi_primary
WBRNAi00030698Inferred_automaticallyRNAi_primary
Expr_patternExpr1016275
Expr1148069
Expr2011547
Expr2029784
Drives_constructWBCnstr00032826
Construct_productWBCnstr00032826
Microarray_results (12)
Expression_clusterWBPaper00037950:pharyngeal-muscle_embryo_enriched
WBPaper00037950:pharyngeal-muscle_embryo_SelectivelyEnriched
WBPaper00038438:D.coniospora_12hr_upregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00042215:wdr-23(tm1817)_upregulated
WBPaper00042477:rsr-2(RNAi)_upregulated_TilingArray
WBPaper00044037:eat-2_upregulated
WBPaper00044316:CH3HgCl_7.5uM_upregulated
WBPaper00044736:oscillating_dev_expression
WBPaper00044743:wdr-23_neuron_upregulated
WBPaper00045017:blmp-1(tm548)_upregulated
WBPaper00045257:bar-1(ga80)_upregulated
WBPaper00045774:clk-1_upregulated
WBPaper00049377:MWCNT_downregulated
WBPaper00050370:dpy-21(e428)_L3_upregulated
WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_20C
WBPaper00050488:mir-34(OverExpression)_vs_N2_regulated_adult_20C
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00053388:dauer_regulated_Cluster1
WBPaper00053402:cco-1(RNAi)_upregulated
WBPaper00053402:his-3(RNAi)_upregulated
WBPaper00053606:elt-2(ca15)_vs_elt-2(ca15);elt-7(tm840)_upregulated
WBPaper00053798:nhr-49(nr2041)_tBOOH_upregulated
WBPaper00054493:hpl-2(tm1489)_downregulated
WBPaper00055013:hmg-3(bar24)_upregulated
WBPaper00055013:spt-16(RNAi)_upregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055354:Rifampicin-Psora_upregulated
WBPaper00055354:Rifampicin_upregulated
WBPaper00055482:pmt-2(RNAi)_upregulated
WBPaper00056090:E.faecalis_upregulated_N2
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00057041:unc-70(cas983)_downregulated
WBPaper00057068:Cadmium_upregulated
WBPaper00057068:numr-1(RNAi)_downregulated_Cadmium
WBPaper00058598:spn-4(tm291)_downregulated
WBPaper00058725:sftb-1(cer6)_upregulated
WBPaper00058725:sftb-1(cer39)_upregulated
WBPaper00059117:B.subtilis_upregulated
WBPaper00059191:hsp-16.2p-LIN-29_downregulated
WBPaper00059253:stearic-acid_upregulated
WBPaper00059421:daf-1(m40)_upregulated
WBPaper00060014:set-2(tm1630)_upregulated
WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00060871:M.humicola-extract_4h_regulated
WBPaper00060911:prx-5(RNAi)_upregulated_mRNA
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061424:Diet_MYb131_upregulated
WBPaper00061527:T16H12.9-kin-9_20752
WBPaper00061530:nhr-49(e2144)_upregulated
WBPaper00061995:mter-4(syb3662syb3403)_downregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062347:blmp-1(tm548)_upregulated
WBPaper00062446:nhr-8(hd117)_upregulated
WBPaper00064005:starvation_upregulated_aptf-1(gk794)_mRNA
WBPaper00064532:pals-25(icb98)_upregulated
WBPaper00064721:fasn-1(g14)_downregulated_starved
WBPaper00065086:JU1400_N.ferruginous_regulated
WBPaper00065096:npr-8(ok1439)_upregulated_Day10_25C
WBPaper00065746:eat-2(ad1113)_upregulated
WBPaper00065749:endu-2(tm4977)_upregulated
WBPaper00065749:Heat-Shock_downregulated_endu-2(tm4977)
WBPaper00065749:Heat-Shock_downregulated_N2
WBPaper00065841:24_1
WBPaper00065926:pgph-2(overepxreesion)_upregulated_glucose
WBPaper00065995:M.humicola-extract_downregulated_N2
WBPaper00066062:xrep-4(lax137)_upregulated
WBPaper00066110:tetraploid_vs_diploid_upregulated
cgc4489_group_14
WBPaper00025141:N2_Expressed_Genes
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00034661:AgNPs_downregulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00047070:N2_starvation_upregulated
WBPaper00047070:N2_UV_upregulated
WBPaper00047070:xpa-1_UV_upregulated
WBPaper00048989:N2_allantoin_downregulated
WBPaper00056330:mrps-5(RNAi)_upregulated
InteractionWBInteraction000280154
Map_infoMapVPosition11.2619Error0.003005
PositivePositive_cloneF09C6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00012854
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene