| WBGene00008062 | SMap | S_parent | Sequence | C41G7 |
|---|
| Identity | Version | 2 |
| | Name | CGC_name | set-32 | Person_evidence | WBPerson1730 |
| | | | | | WBPerson268 |
| | | | | | WBPerson632 |
| | | Sequence_name | C41G7.4 |
| | | Molecular_name | C41G7.4 |
| | | | C41G7.4.1 |
| | | | CE42716 |
| | | Other_name | tag-328 | Paper_evidence |
| | | | | Person_evidence | WBPerson201 |
| | | | CELE_C41G7.4 | Accession_evidence | NDB | BX284601 |
| | | Public_name | set-32 |
| | DB_info | Database | AceView | gene | 1K97 |
| | | | WormQTL | gene | WBGene00008062 |
| | | | WormFlux | gene | WBGene00008062 |
| | | | NDB | locus_tag | CELE_C41G7.4 |
| | | | Panther | gene | CAEEL|WormBase=WBGene00008062|UniProtKB=Q93368 |
| | | | | family | PTHR47250 |
| | | | NCBI | gene | 183391 |
| | | | RefSeq | protein | NM_060128.3 |
| | | | TREEFAM | TREEFAM_ID | TF321419 |
| | | | TrEMBL | UniProtAcc | Q93368 |
| | | | UniProt_GCRP | UniProtAcc | Q93368 |
| | Species | Caenorhabditis elegans |
| | History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 |
| | | | 2 | 03 May 2007 10:33:07 | WBPerson2970 | Name_change | CGC_name | set-32 |
| | | | | | | | Other_name | tag-328 |
| | Status | Live |
| Gene_info | Biotype | SO:0001217 |
| | Gene_class | set |
| | Allele (42) |
| | Strain | WBStrain00036209 |
| | RNASeq_FPKM (74) |
| | Ortholog (53) |
| | Paralog (20) |
| | Structured_description | Concise_description | set-32 encodes a divergent histone H3 lysine-9 (H3K9) methyltransferase homolog with a SET domain; SET-32 has no obvious non-nematode orthologs, but several paralogs (SET-6, SET-13, SET-15, SET-19, SET-20, and SET-21); set-32(ok1457) has no obvious mutant phenotype, and SET-32 has no obvious function in mass RNAi assays. | Paper_evidence | WBPaper00030864 |
| | | | | Curator_confirmed | WBPerson567 |
| | | | | Date_last_updated | 11 Oct 2007 00:00:00 |
| | | Automated_description | Enriched in several structures, including Z1.p; germ line; germline precursor cell; head mesodermal cell; and male distal tip cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; glp-1; and eat-2 based on microarray and RNA-seq studies. Is affected by thirteen chemicals including manganese chloride; Alovudine; and stavudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SET domain superfamily and SET domain. | Paper_evidence | WBPaper00065943 |
| | | | | Curator_confirmed | WBPerson324 |
| | | | | | WBPerson37462 |
| | | | | Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase |
| | | | | Date_last_updated | 29 Nov 2023 00:00:00 |
| Molecular_info | Corresponding_CDS | C41G7.4 |
| | Corresponding_CDS_history | C41G7.4:wp191 |
| | Corresponding_transcript | C41G7.4.1 |
| | Other_sequence | CBC11117_1 |
| | Associated_feature | WBsf218298 |
| Experimental_info | RNAi_result | WBRNAi00091522 | Inferred_automatically | RNAi_primary |
| | | WBRNAi00115387 | Inferred_automatically | RNAi_primary |
| | | WBRNAi00042318 | Inferred_automatically | RNAi_primary |
| | | WBRNAi00029735 | Inferred_automatically | RNAi_primary |
| | | WBRNAi00062516 | Inferred_automatically | RNAi_primary |
| | Expr_pattern | Expr14250 |
| | | Expr14373 |
| | | Expr16244 |
| | | Expr16245 |
| | | Expr1012882 |
| | | Expr1033500 |
| | | Expr1146307 |
| | | Expr2015777 |
| | | Expr2034010 |
| | Drives_construct | WBCnstr00033266 |
| | | WBCnstr00042858 |
| | Construct_product | WBCnstr00033266 |
| | Microarray_results (20) |
| | Expression_cluster | WBPaper00031040:TGF-beta_adult_downregulated |
| | | WBPaper00037950:A-class-motor-neurons_L1-larva_expressed |
| | | WBPaper00037950:A-class-motor-neurons_L2-larva_expressed |
| | | WBPaper00037950:all-neurons_L1-larva_expressed |
| | | WBPaper00037950:AVE-neuron_L1-larva_expressed |
| | | WBPaper00037950:bodywall-muscle_L1-larva_expressed |
| | | WBPaper00037950:bodywall-muscle_L2-larva_expressed |
| | | WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed |
| | | WBPaper00037950:coelomocytes_L1-larva_expressed |
| | | WBPaper00037950:coelomocytes_L2-larva_expressed |
| | | WBPaper00037950:dopaminergic-neurons_L1-larva_expressed |
| | | WBPaper00037950:excretory-cell_L2-larva_expressed |
| | | WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed |
| | | WBPaper00037950:germline-precursors_blastula-embryo_expressed |
| | | WBPaper00037950:germline-precursors_embryo_enriched |
| | | WBPaper00037950:hypodermis_L1-larva_expressed |
| | | WBPaper00037950:intestine_L1-larva_expressed |
| | | WBPaper00037950:pharyngeal-muscle_L1-larva_expressed |
| | | WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed |
| | | WBPaper00038168:lin-15B(n744)_upregulated |
| | | WBPaper00042194:nhr-114(RNAi)_upregulated |
| | | WBPaper00042561:smg-2(RNAi)_downregulated |
| | | WBPaper00044037:eat-2_downregulated |
| | | WBPaper00044656:tatn-1(qd182)_downregulated |
| | | WBPaper00044736:flat_dev_expression |
| | | WBPaper00044760:germline_specific |
| | | WBPaper00045050:csr-1(hypomorph)_downregulated |
| | | WBPaper00045521:Gender_Neutral |
| | | WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h |
| | | WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h |
| | | WBPaper00048611:MnCl2_downregulated |
| | | WBPaper00048690:gonad-hermaphrodite-biased |
| | | WBPaper00048690:hermaphrodite-Z1-Z4-daughter_enriched |
| | | WBPaper00048988:neuron_expressed |
| | | WBPaper00050080:rbr-2(tm3141)_downregulated |
| | | WBPaper00050163:chd-3(eh4)_downregulated_100-cell-embryo |
| | | WBPaper00050234:lin-28(RNAi)_upregulated |
| | | WBPaper00050488:adult_vs_dauer_regulated_N2_20C |
| | | WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult |
| | | WBPaper00050990:body-muscle_enriched |
| | | WBPaper00050990:body-muscle_expressed |
| | | WBPaper00051039:germline_enriched |
| | | WBPaper00051265:F4_hrde-1(tm1200)_upregulated |
| | | WBPaper00051265:F4_morc-1(tm6048)_upregulated |
| | | WBPaper00052884:emb-4(hc60)_downregulated |
| | | WBPaper00053184:sma-2(rax5)_downregulated |
| | | WBPaper00053184:sma-4(rax3)_downregulated |
| | | WBPaper00053295:lin-22(icb38)_downregulated |
| | | WBPaper00053302:alovudine_24h_regulated |
| | | WBPaper00053302:stavudine_24h_regulated |
| | | WBPaper00053302:zidovudine_72h_regulated |
| | | WBPaper00053321:PGCs_enriched_NuGen |
| | | WBPaper00053599:oocyte_vs_mitosis_upregulated |
| | | WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_upregulated |
| | | WBPaper00053606:N2_vs_elt-2(ca15)_upregulated |
| | | WBPaper00053810:nuo-6(qm200)_downregulated |
| | | WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated |
| | | WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated |
| | | WBPaper00055482:pmt-2(RNAi)_downregulated |
| | | WBPaper00055648:germline_expressed |
| | | WBPaper00056034:pals-22(jy3)_downregulated |
| | | WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047) |
| | | WBPaper00056090:E.faecalis_downregulated_N2 |
| | | WBPaper00056139:soil-microbiota_downregulated |
| | | WBPaper00056826:hmc_biased |
| | | WBPaper00057041:spc-1(cas971)_upregulated |
| | | WBPaper00058598:sin-3(tm1276)_upregulated |
| | | WBPaper00058948:PA14_upregulated |
| | | WBPaper00058969:RIS_depleted |
| | | WBPaper00059356:set-6(ok2195)_baz-2(tm0235)_regulated |
| | | WBPaper00059664:srbc-48(ac23)_downregulated |
| | | WBPaper00059987:Wounding_downregulated |
| | | WBPaper00060014:set-2(tm1630)_upregulated |
| | | WBPaper00060445:ikb-1(nr2027)_upregulated_L4 |
| | | WBPaper00060445:nfki-1(cer1)_upregulated_L4 |
| | | WBPaper00060459:bcat-1(RNAi)_downregulated |
| | | WBPaper00060661:sensory-neuron_depleted |
| | | WBPaper00060909:atfs-1(cmh15)_upregulated |
| | | WBPaper00061203:sin-3(tm1276)_downregulated |
| | | WBPaper00061340:Germline |
| | | WBPaper00061439:unc-30(ok613)_downregulated |
| | | WBPaper00061439:unc-30(ok613)_downregulated_P.aeruginosa-infection |
| | | WBPaper00061527:puf-3-oma-2_18268 |
| | | WBPaper00062159:hda-2(ok1479)_downregulated |
| | | WBPaper00062325:muscle_depleted_coding-RNA |
| | | WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141) |
| | | WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20) |
| | | WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141) |
| | | WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20) |
| | | WBPaper00064403:Heat-killed-E.Coli_upregulated |
| | | WBPaper00064716:paraquat_upregulated |
| | | WBPaper00065096:Day10_vs_Day1_upregulated |
| | | WBPaper00065984:pals-17(syb3980)_upregulated |
| | | WBPaper00065993:glp-1(e2141)_downregulated |
| | | cgc4489_group_1 |
| | | WBPaper00025032:cluster_1 |
| | | WBPaper00035479:daf-16(RNAi)_upregulated |
| | | WBPaper00035905:FBF-1_Associated |
| | | WBPaper00036286:Pattern_B |
| | | WBPaper00036429:glp-1(oz112)_upregulated |
| | | WBPaper00038060:SUMO-1_upregulated |
| | | WBPaper00040963:TA300_down |
| | | WBPaper00041002:HF_3d_2.0mM_Down |
| | | WBPaper00041606:CE_S.marcescens_regulated |
| | | WBPaper00041606:CE_X.nematophila_regulated |
| | | WBPaper00041906:I-3690_vs_OP50_3d |
| | | WBPaper00045263:0.1mM-paraquat_upregulated |
| | | WBPaper00045673:colistin_downregulated |
| | | WBPaper00048989:eat-2(ad465)_rapamycin_upregulated |
| | | WBPaper00048989:N2_allantoin_upregulated |
| | | WBPaper00051387:Triclosan_downregulated |
| | | WBPaper00056330:mrps-5(RNAi)_downregulated |
| | | [cgc5767]:cluster_1 |
| | | [cgc5767]:expression_class_M |
| | | [cgc5767]:expression_class_MD |
| | | [cgc5767]:expression_class_MD_pd(53_min) |
| | | [cgc5767]:expression_class_SM |
| | | [cgc5767]:expression_class_SMD |
| | | [cgc6390]:intrinsic |
| | Interaction | WBInteraction000238787 |
| | | WBInteraction000290578 |
| | | WBInteraction000313800 |
| | | WBInteraction000359288 |
| | | WBInteraction000473842 |
| | | WBInteraction000521420 |
| Map_info | Map | I | Position | 3.78782 | Error | 0.001312 |
| | Positive | Positive_clone | C41G7 | Inferred_automatically | From sequence, transcript, pseudogene data |
| | Mapping_data | Multi_point | 5155 |
| | | | 4148 |
| | Pseudo_map_position |
| Reference (29) |
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission |
| Method | Gene |
