WormBase Tree Display for Gene: WBGene00007766

WBGene00007766 SMap: S_parent: Sequence: C27C7
  Identity: Version: 1
    Name: Sequence_name: C27C7.1
      Molecular_name (3)
      Other_name: CELE_C27C7.1 Accession_evidence: NDB BX284601
      Public_name: C27C7.1
    DB_info: Database: AceView gene 1M31
        WormQTL gene WBGene00007766
        WormFlux gene WBGene00007766
        NDB locus_tag CELE_C27C7.1
        NCBI gene 173029
        RefSeq protein NM_060522.6
        TREEFAM TREEFAM_ID TF352637
        TrEMBL UniProtAcc Q9XVC6
        UniProt_GCRP UniProtAcc Q9XVC6
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (44)
    RNASeq_FPKM (74)
    Ortholog: chrI_pilon.g2267 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog: WBGene00019189 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00011804 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00021884 Caenorhabditis elegans From_analysis: TreeFam
    Structured_description: Automated_description: Enriched in several structures, including I5 neuron; XXX cell; cholinergic neurons; germ line; and head mesodermal cell based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and age-1 based on microarray; tiling array; and RNA-seq studies. Is affected by eleven chemicals including manganese chloride; Zidovudine; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C27C7.1
    Corresponding_transcript: C27C7.1.1
    Associated_feature (12)
  Experimental_info: RNAi_result: WBRNAi00041332 Inferred_automatically: RNAi_primary
      WBRNAi00016237 Inferred_automatically: RNAi_primary
      WBRNAi00053423 Inferred_automatically: RNAi_primary
      WBRNAi00029267 Inferred_automatically: RNAi_primary
      WBRNAi00061739 Inferred_automatically: RNAi_primary
      WBRNAi00003031 Inferred_automatically: RNAi_primary
      WBRNAi00041331 Inferred_automatically: RNAi_primary
      WBRNAi00006226 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1018960
      Expr1033365
      Expr1145374
      Expr2001166
      Expr2019388
    Drives_construct: WBCnstr00033496
    Construct_product: WBCnstr00033496
    Microarray_results (24)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00032031:DConiospora_upregulated_cDNA_12h
      WBPaper00032479:CB4856vsN2_LifeStageProfile_Variation
      WBPaper00033065:cyc-1(RNAi)_downregulated
      WBPaper00034636:microwave_upregulated
      WBPaper00035211:age-1_vs_age-1_downregulated
      WBPaper00036231:long-telomeres_upregulated
      WBPaper00037624:ets-4(ok165)_downregulated
      WBPaper00037950:A-class-motor-neurons_embryo_enriched
      WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:bodywall-muscle_larva_enriched
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:germline-precursors_embryo_enriched
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00040560:hpl-2_L3_upregulated
      WBPaper00040990:PA14_downregulated
      WBPaper00044246:pgrn-1_ced-3_ced-1_downregulated
      WBPaper00044656:tatn-1(qd182)_downregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00044760:germline_specific
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00045521:Gender_Neutral
      WBPaper00045571:germline-ablation_downregulated
      WBPaper00045729:gld-2(RNAi)_downregulated
      WBPaper00045774:clk-1_downregulated
      WBPaper00045861:set-2(ok952)_upregulated
      WBPaper00046012:tdp-1(ok803)_downregulated
      WBPaper00046337:polysomal_daf-2_vs_daf-2;daf-16_upregulated
      WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
      WBPaper00046805:csr-1(RNAi)_downregulated_Set1
      WBPaper00046805:csr-1(RNAi)_downregulated_Set2
      WBPaper00048611:MnCl2_downregulated
      WBPaper00048971:daf-16(mgDf50)_downregulated_L1
      WBPaper00048988:neuron_expressed
      WBPaper00049098:hrde-1(tm1200)-induced_15C
      WBPaper00049098:hrde-1(tm1200)-induced_p15C
      WBPaper00049498:npr-1(ur89)_regulated_6
      WBPaper00049942:hsf-1(RNAi)_upregulated
      WBPaper00050080:rbr-2(tm3141)_downregulated
      WBPaper00050163:chd-3(eh4)_downregulated_24-cell-embryo
      WBPaper00050193:lsm-1(tm3585)_upregulated_L3
      WBPaper00050193:met-2(n4256)set-25(n5021)_upregulated_L1
      WBPaper00050234:lin-28(RNAi)_upregulated
      WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
      WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:starvation_regulated_LowSalt
      WBPaper00050743:elli-1(sam-3)_upregulated
      WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:downregulated_P-granule(-)GFP(-)_vs_control_day1-adult
      WBPaper00050859:downregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050859:downregulated_pgl-1(ct131)_vs_control_day1-adult
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051265:F1_morc-1(tm6048)_downregulated
      WBPaper00051265:F4_morc-1(tm6048)_upregulated
      WBPaper00051352:Long-Term-Association-Memory_downregulated
      WBPaper00051404:alg-2(ok304)_downregulated
      WBPaper00051558:fog-2(q71)_regulated
      WBPaper00052884:emb-4(hc60)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053302:zidovudine_24h_regulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053308:NMD(-)_upregulated_SMD-2_non-binding_ClassIII
      WBPaper00053388:dauer_regulated_Cluster2
      WBPaper00053713:Pheromone-induced_postdauer_vs_control_upregulated
      WBPaper00053810:clk-1(qm30)_upregulated
      WBPaper00053810:daf-2(e1370)_downregulated
      WBPaper00053810:isp-1(qm150)_upregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00053814:25C_upregulated_OP50
      WBPaper00053814:25C_upregulated_PY79
      WBPaper00053909:N2_vs_CB4856_upregulated
      WBPaper00055354:Rapamycin-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Metformin_downregulated
      WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
      WBPaper00055354:Rapamycin-Rifampicin_downregulated
      WBPaper00055354:Rapamycin_upregulated
      WBPaper00055354:Rifampicin_downregulated
      WBPaper00055364:uaf-1(n4588)_upregulated
      WBPaper00055648:germline_expressed
      WBPaper00055941:atfs-1(gk3094)_downregulated
      WBPaper00055971:nhl-2(ok818)_25C_upregulated
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056161:male_enriched_siRNA
      WBPaper00056218:daf-16(mu86)_downregulated_Day3
      WBPaper00056218:daf-16(mu86)_downregulated_Day5
      WBPaper00056218:daf-16(mu86)_downregulated_Day7
      WBPaper00056284:ints-1(RNAi)_upregulated
      WBPaper00056284:ints-11(RNAi)_upregulated
      WBPaper00056446:hsb-1(cg116)_downregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
      WBPaper00056471:S.aureus-4h_downregulated_N2
      WBPaper00056826:hmc_biased
      WBPaper00056997:nmad-1(ok3133)_downregulated_germline_25C
      WBPaper00057006:DietaryRestriction_downregulated
      WBPaper00057154:HeatShock_downregulated_mRNA
      WBPaper00057265:metaformin_downregulated_OP50
      WBPaper00057288:iff-1(RNAi)_upregulated_transcript
      WBPaper00058691:cfp-1(tm6369)_downregulated
      WBPaper00058691:sin-3(tm1276)_downregulated
      WBPaper00058942:henn-1(pk2295)_upregulated
      WBPaper00058958:100mGy-irradiation-72h_upregulated
      WBPaper00059426:Ag-nanoparticles_upregulated
      WBPaper00059440:LAG-1_activated_4hr-auxin
      WBPaper00059605:mut-16(pk710)_upregulated
      WBPaper00059739:hira-1(gk835598)_upregulated_L1
      WBPaper00059824:rnp-6(dh1127)_regulated_OP50
      WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
      WBPaper00060224:atf-6(ok551)_downregulated
      WBPaper00060526:plp-1(ok2155)_upregulated
      WBPaper00060661:sensory-neuron_depleted
      WBPaper00060683:hlh-11(ko1)_downregulated
      WBPaper00060683:hlh-11(overexpression)_upregulated
      WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00060909:atfs-1(cmh15)_upregulated
      WBPaper00060909:atfs-1(et18)_upregulated
      WBPaper00060951:mrpl-2(osa3)_upregulated
      WBPaper00061007:S.aquatilis_downregulated
      WBPaper00061045:Y56A3A.22(cck200)_downregulated
      WBPaper00061340:XXX
      WBPaper00061478:pie-1(ne4433)_upregulated
      WBPaper00061527:puf-3-oma-2_18268
      WBPaper00061753:csr-1(tor159)_downregulated_25C
      WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR
      WBPaper00061995:mter-4(syb3662syb3403)_upregulated
      WBPaper00062056:lin-15B(n744)_downregulated
      WBPaper00062159:hda-2(ok1479)_downregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062354:H.zoospora_6h_regulated
      WBPaper00062446:nhr-8(hd117)_downregulated
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064315:mes-3(bn199)_upregulated_EGCs
      WBPaper00064315:mes-4(bn73)_upregulated_EGCs
      WBPaper00064473:ets-4(rrr16)_upregulated
      WBPaper00064716:paraquat_upregulated
      WBPaper00064727:daf-2(e1370)_downregulated
      WBPaper00064728:cpl-1(W32AY35A)_upregulated
      WBPaper00064871:hypoxia_upregulated_F1
      WBPaper00065005:sams-3(RNAi)_upregulated
      WBPaper00065005:sams-4(RNAi)_upregulated
      WBPaper00065158:25C_vs_15C_upregulated_WholeAnimal
      WBPaper00065749:Heat-Shock_upregulated_endu-2(tm4977)
      WBPaper00065841:1_0
      WBPaper00065984:pals-17(syb3980)_upregulated
      WBPaper00066085:sin-3(tm1276)_downregulated
      WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
      WBPaper00066163:set-2(ok952)_upregulated_N2
      cgc4386_cluster_3_1
      cgc4489_group_2
      WBPaper00024393:strongly_regulated_dauer_genes
      WBPaper00025032:cluster_4
      WBPaper00025099:NI_specific
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Enriched_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00029437:rde-4_upregulated
      WBPaper00030839:Embryo_A_Class
      WBPaper00034757:down_by_oxidative_stress
      WBPaper00035873:osm-8_regulated
      WBPaper00035873:osmotically_regulated
      WBPaper00035905:FBF-1_Associated
      WBPaper00037901:GLD-1_mRNA_targets
      WBPaper00038172:aak-2overexpression_up_regulated
      WBPaper00040210:Diazinon_24C_regulated
      WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
      WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.5
      WBPaper00040821:Au-NP_regulated
      WBPaper00040858:eQTL_age_regulated_developing
      WBPaper00040858:eQTL_regulated_developing
      WBPaper00040858:eQTL_regulated_juvenile
      WBPaper00040858:eQTL_regulated_old
      WBPaper00040858:eQTL_regulated_reproductive
      WBPaper00041606:CE_B.thuringiensis-DB27_regulated
      WBPaper00041606:CE_S.marcescens_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041939:control_vs_UVC-EtBr-exposed_24h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00042258:DA1877_downregulated_GravidAdult
      WBPaper00042331:a-SWCNTs_downregulated
      WBPaper00045263:0.1mM-paraquat_upregulated
      WBPaper00045263:isp-1(qm150)_upregulated
      WBPaper00045263:nuo-6(qm200)_upregulated
      WBPaper00045263:ProLongevity-mtROS_upregulated
      WBPaper00045865:biofilm_upregulated_A
      WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
      [cgc5767]:cluster_3
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_MD
      [cgc5767]:expression_class_MD_pd(53_min)
      [cgc5767]:expression_class_MD_pd(66_min)
      [cgc5767]:expression_class_SM
      [cgc5767]:expression_class_SMD
      [cgc6390]:Cluster_F
      [cgc6390]:oogenesis-enriched
    Interaction (33)
  Map_info: Positive: Positive_clone: C27C7 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I 8.65574
  Method: Gene