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WormBase Tree Display for Gene: WBGene00007731

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Name Class

WBGene00007731SMapS_parentSequenceC25G4
IdentityVersion1
NameSequence_nameC25G4.3
Molecular_nameC25G4.3a
C25G4.3a.1
CE40440
C25G4.3b
CE05304
C25G4.3b.1
Other_nameCELE_C25G4.3Accession_evidenceNDBBX284604
Public_nameC25G4.3
DB_infoDatabaseAceViewgene4N210
WormQTLgeneWBGene00007731
WormFluxgeneWBGene00007731
NDBlocus_tagCELE_C25G4.3
PanthergeneCAEEL|WormBase=WBGene00007731|UniProtKB=Q18170
familyPTHR14725
NCBIgene178195
RefSeqproteinNM_001268716.3
NM_001268715.3
TREEFAMTREEFAM_IDTF316892
TrEMBLUniProtAccQ18170
D4PH98
UniProt_GCRPUniProtAccQ18170
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:48WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (54)
RNASeq_FPKM (74)
GO_annotation00115807
Contained_in_operonCEOP4516
Ortholog (28)
Structured_descriptionAutomated_descriptionPredicted to be involved in rRNA processing. Is an ortholog of human RBFA (ribosome binding factor A).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC25G4.3a
C25G4.3b
Corresponding_CDS_historyC25G4.3:wp165
Corresponding_transcriptC25G4.3a.1
C25G4.3b.1
Other_sequence (20)
Associated_featureWBsf231020
Experimental_infoRNAi_resultWBRNAi00011179Inferred_automaticallyRNAi_primary
WBRNAi00041212Inferred_automaticallyRNAi_primary
WBRNAi00029203Inferred_automaticallyRNAi_primary
Expr_patternExpr1025490
Expr1033346
Expr1145248
Expr2001101
Expr2019322
Drives_constructWBCnstr00033526
Construct_productWBCnstr00033526
Microarray_results (19)
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00033065:isp-1-1(qm150)_upregulated
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:hypodermis_larva_enriched
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044656:tatn-1(qd182)_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00045521:Gender_Neutral
WBPaper00048988:neuron_expressed
WBPaper00049545:cco-1(RNAi)_downregulated
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
WBPaper00049942:hsf-1(RNAi)_downregulated
WBPaper00050234:lin-28(RNAi)_upregulated
WBPaper00050344:AFD-neuron_enriched
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:pharynx_expressed
WBPaper00051039:germline_enriched
WBPaper00052884:emb-4(hc60)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
WBPaper00053599:oocyte_vs_mitosis_upregulated
WBPaper00053810:daf-2(e1370)_downregulated
WBPaper00055648:germline_expressed
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00057288:iff-1(RNAi)_downregulated_transcript
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00060661:sensory-neuron_depleted
WBPaper00061527:C47G2.3-C47B2.9
WBPaper00062193:hsf-1(RNAi)_downregulated
WBPaper00062193:skn-1(RNAi)_downregulated
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00064071:NHR-49_interacting
WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064716:paraquat_upregulated
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
cgc4489_group_4
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00030985:Serratia_marcesens_downregulated
WBPaper00035905:FBF-1_Associated
WBPaper00036286:Pattern_H
WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2down
WBPaper00040426:CYD-1_CDK-4_upregulated
WBPaper00041002:HF_3d_2.0mM_Up
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00045960:L1-L4-lethargus_downregulated
WBPaper00045960:L4-lethargus_downregulated
WBPaper00048637:lin-35(n745)_starvation_downregulated
WBPaper00048989:N2_allantoin_upregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
[cgc5767]:expression_class_M
[cgc5767]:expression_class_SM
InteractionWBInteraction000124812
WBInteraction000266568
WBInteraction000328791
WBInteraction000452666
Map_info (2)
MethodGene