WormBase Tree Display for Gene: WBGene00007704

WBGene00007704 SMap: S_parent: Sequence: C24H11
  Identity: Version: 2
    Name: CGC_name: mdt-21
      Sequence_name: C24H11.9
      Molecular_name: C24H11.9
        C24H11.9.1
        CE36687
      Other_name: CeSrb7
        CELE_C24H11.9 Accession_evidence: NDB BX284603
      Public_name: mdt-21
    DB_info: Database: AceView gene 3M869
        WormQTL gene WBGene00007704
        WormFlux gene WBGene00007704
        NDB locus_tag CELE_C24H11.9
        Panther gene CAEEL|WormBase=WBGene00007704|UniProtKB=Q6BER6
          family PTHR13381
        NCBI gene 3565572
        RefSeq protein NM_001026013.3
        SwissProt UniProtAcc Q6BER6
        UniProt_GCRP UniProtAcc Q6BER6
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Split_from: WBGene00007021
        2 21 Jul 2006 11:25:26 WBPerson2970 Name_change: CGC_name: mdt-21
                Other_name: CeSrb7
      Split_from: WBGene00007021
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mdt
    Allele (53)
    Strain: WBStrain00052123
    RNASeq_FPKM (74)
    GO_annotation: 00081895
      00081896
      00081897
      00081898
      00081899
      00081900
      00081901
      00115783
    Contained_in_operon: CEOP3831
    Ortholog (29)
    Structured_description: Automated_description: Predicted to enable transcription coregulator activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of mediator complex. Is an ortholog of human MED21 (mediator complex subunit 21). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C24H11.9
    Corresponding_transcript: C24H11.9.1
    Other_sequence (17)
    Associated_feature: WBsf994487
      WBsf225857
      WBsf225858
  Experimental_info: RNAi_result: WBRNAi00011129 Inferred_automatically: RNAi_primary
      WBRNAi00085246 Inferred_automatically: RNAi_primary
      WBRNAi00041121 Inferred_automatically: RNAi_primary
      WBRNAi00008431 Inferred_automatically: RNAi_primary
      WBRNAi00066087 Inferred_automatically: RNAi_primary
      WBRNAi00112428 Inferred_automatically: RNAi_primary
      WBRNAi00006728 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1019302
      Expr1033333
      Expr1145157
      Expr2013476
      Expr2031710
    Antibody: WBAntibody00001836
    Microarray_results (19)
    Expression_cluster: WBPaper00037950:all-neurons_embryo_enriched
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:bodywall-muscle_larva_enriched
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00040285:H2S_24hr_upregulated
      WBPaper00042561:smg-2(RNAi)_downregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045521:Gender_Neutral
      WBPaper00045774:clk-1_downregulated
      WBPaper00048988:neuron_expressed
      WBPaper00050163:chd-3(eh4)_upregulated_24-cell-embryo
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050990:GABAergic-neuron_enriched
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00052884:emb-4(hc60)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053810:daf-2(e1370)_downregulated
      WBPaper00053810:nuo-6(qm200)_downregulated
      WBPaper00055334:DLC-1_interacting
      WBPaper00055482:pmt-2(RNAi)_downregulated
      WBPaper00060014:set-2(zr2012)_upregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00061007:S.aquatilis_downregulated
      WBPaper00061203:spr-1(ok2144)_downregulated
      WBPaper00062159:hda-2(ok1479)_downregulated
      WBPaper00062325:muscle_enriched_coding-RNA
      WBPaper00064716:paraquat_upregulated
      WBPaper00065158:AFD_enriched
      WBPaper00065975:P-body_vs_oocyte_depleted
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00036286:Pattern_F
      WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
      WBPaper00040858:eQTL_age_regulated_developing
      WBPaper00041174:genotypic
      WBPaper00041174:genotypic_prime
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00045960:L1-L4-lethargus_downregulated
      WBPaper00045960:L4-lethargus_downregulated
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_SM
    Interaction: WBInteraction000556035
      WBInteraction000556842
      WBInteraction000561233
  Map_info (3)
  Reference: WBPaper00003858
    WBPaper00006530
    WBPaper00028984
    WBPaper00029038
    WBPaper00038491
    WBPaper00055090
    WBPaper00065308
  Remark: mdt-21 was improperly linked to C24H11.6. C24H11.6 is now split into C24H11.6 and C24H11.9 based on C. briggsae and human homologies. C24H11.6 corresponds to the 5' end and C24H11.9 corresponds to the 3' end and MDT-21 homologue Curator_confirmed: WBPerson1983
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene