WormBase Tree Display for Gene: WBGene00007100

WBGene00007100 SMap: S_parent: Sequence: B0024
  Identity: Version: 2
    Name: CGC_name: asps-1 Person_evidence: WBPerson4034
      Sequence_name: B0024.10
      Molecular_name: B0024.10
        B0024.10.1
        CE43076
      Other_name: CELE_B0024.10 Accession_evidence: NDB BX284605
      Public_name: asps-1
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:47 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 31 May 2017 14:23:55 WBPerson2970 Name_change: CGC_name: asps-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: asps
    Allele (41)
    Strain: WBStrain00031704
    RNASeq_FPKM (74)
    GO_annotation: 00058013
      00058014
      00058015
      00058016
      00058017
    Contained_in_operon: CEOP5252
    Ortholog (37)
    Paralog: WBGene00019163 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in glucose homeostasis and intracellular protein transport. Predicted to be located in cytoplasm; nucleus; and vesicle membrane. Expressed in head; hypodermis; intestine; pharynx; and tail. Human ortholog(s) of this gene implicated in alveolar soft part sarcoma. Is an ortholog of human ASPSCR1 (ASPSCR1 tether for SLC2A4, UBX domain containing). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:4239 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:13825)
  Molecular_info: Corresponding_CDS: B0024.10
    Corresponding_CDS_history: B0024.10:wp195
    Corresponding_transcript: B0024.10.1
    Other_sequence: CRC04070_1
      CBC05234_1
      CJC05198_1
      CJC02146_1
      CBC04898_1
      CR05607
    Associated_feature: WBsf234369
      WBsf234370
  Experimental_info: RNAi_result (16)
    Expr_pattern: Expr153
      Expr9477
      Expr1018688
      Expr1033050
      Expr1142852
      Expr2000022
      Expr2018237
    Drives_construct: WBCnstr00034000
    Construct_product: WBCnstr00014042
      WBCnstr00034000
    Microarray_results (20)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00032031:DConiospora_upregulated_cDNA_24h
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00044426:rotenone_24h_downregulated
      WBPaper00044656:tatn-1(qd182)_downregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045521:Gender_Neutral
      WBPaper00045571:germline-ablation_downregulated
      WBPaper00048923:Aging_regulated
      WBPaper00048988:neuron_expressed
      WBPaper00050344:AFD-neuron_enriched
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050743:elli-1(sam-3)_upregulated
      WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051245:epidermis_cytoplasm_expressed
      WBPaper00051245:intestine_cytoplasm_expressed
      WBPaper00052884:emb-4(hc60)_downregulated
      WBPaper00053184:sma-2(rax5)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
      WBPaper00055334:DLC-1_interacting
      WBPaper00055354:eat-2(ad1116)_upregulated
      WBPaper00055354:Metformin_downregulated
      WBPaper00055354:Rapamycin_upregulated
      WBPaper00055354:Rifampicin_downregulated
      WBPaper00055648:germline_expressed
      WBPaper00056034:pals-22(jy3)_downregulated
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056443:sek-1(km4)_downregulated
      WBPaper00058958:100mGy-irradiation-72h_downregulated
      WBPaper00059254:CSR-1_interacting
      WBPaper00059664:srbc-48(ac23)_downregulated
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060661:sensory-neuron_depleted
      WBPaper00060683:hlh-11(ko1)_downregulated
      WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00060909:atfs-1(cmh15)_upregulated
      WBPaper00061007:S.aquatilis_downregulated
      WBPaper00061341:28C_24h_downregulated
      WBPaper00061439:unc-30(ok613)_downregulated
      WBPaper00061527:T02E1.2-uri-1
      WBPaper00062159:hda-2(ok1479)_downregulated
      WBPaper00064005:starvation_upregulated_N2_protein
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064163:ZNFX-1_interacting_embryo
      WBPaper00064505:tamoxifen_upregulated
      WBPaper00064716:paraquat_upregulated
      WBPaper00065096:Day10_vs_Day1_upregulated
      WBPaper00065373:sek-1(km4)_upregulated_cisplatin
      WBPaper00065975:P-body_vs_oocyte_depleted
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066110:tetraploid_vs_diploid_downregulated
      WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
      cgc4489_group_25
      WBPaper00025032:cluster_105
      WBPaper00025032:PAL-1_target_genes
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Enriched_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:Resveratrol_regulated_daf-16
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00030839:Embryo_A_Class
      WBPaper00030839:Embryo_Pan_Neuronal
      WBPaper00031003:24hr_muscle_enriched
      WBPaper00031003:total_muscle_enriched
      WBPaper00036123:Atrazine_regulated
      WBPaper00036286:Pattern_B
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00053236:Starvation_regulated_GR1307
      [cgc5767]:cluster_58
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_MD
      [cgc5767]:expression_class_MD_pd(53_min)
      [cgc5767]:expression_class_SM
      [cgc5767]:expression_class_SMD
      [cgc6390]:Cluster_E
      [cgc6390]:intrinsic
    Interaction (107)
  Map_info: Map: V Position: 2.47651
    Positive: Positive_clone: B0024 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00034662
    WBPaper00038444
    WBPaper00038491
    WBPaper00055090
    WBPaper00059314
    WBPaper00060859
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene