WormBase Tree Display for Gene: WBGene00006654

WBGene00006654 SMap: S_parent: Sequence: C40H5
  Identity: Version: 1
    Name: CGC_name: ttx-3 Person_evidence: WBPerson1417
      Sequence_name: C40H5.5
      Molecular_name: C40H5.5a
        C40H5.5a.1
        CE27107
        C40H5.5b
        CE43132
        C40H5.5b.1
      Other_name: CELE_C40H5.5 Accession_evidence: NDB BX284606
      Public_name: ttx-3
    DB_info: Database: AceView gene XM384
        WormQTL gene WBGene00006654
        WormFlux gene WBGene00006654
        NDB locus_tag CELE_C40H5.5
        Panther gene CAEEL|WormBase=WBGene00006654|UniProtKB=G5EE86
          family PTHR24208
        NCBI gene 181357
        RefSeq protein NM_001270239.2
            NM_001270240.3
        SwissProt UniProtAcc G5EE86
        UniProt_GCRP UniProtAcc G5EE86
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:41 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info (11)
  Molecular_info: Corresponding_CDS: C40H5.5a
      C40H5.5b
    Corresponding_CDS_history: C40H5.5:wp47
    Corresponding_transcript: C40H5.5a.1
      C40H5.5b.1
    Other_sequence: U72211
      JI479595.1
      Acan_isotig13660
      JI171393.1
      Dviv_isotig25707
    Associated_feature (20)
    Gene_product_binds: WBsf945408
      WBsf945409
      WBsf945410
    Transcription_factor: WBTranscriptionFactor000033
      WBTranscriptionFactor000440
  Experimental_info: RNAi_result: WBRNAi00011825 Inferred_automatically: RNAi_primary
      WBRNAi00042268 Inferred_automatically: RNAi_primary
      WBRNAi00067793 Inferred_automatically: RNAi_primary
      WBRNAi00064325 Inferred_automatically: RNAi_primary
    Expr_pattern (15)
    Drives_construct (89)
    Construct_product (12)
    Microarray_results (22)
    Expression_cluster: WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:A-class-motor-neurons_larva_enriched
      WBPaper00037950:all-neurons_embryo_enriched
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:bodywall-muscle_embryo_enriched
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
      WBPaper00044760:somatic_specific
      WBPaper00045390:ubc-9(RNAi)_downregulated
      WBPaper00045974:NSM_enriched_DSN-treated_RNAseq
      WBPaper00045974:NSM_enriched_totalRNA_RNAseq
      WBPaper00045974:NSM_enriched_totalRNA_tiling
      WBPaper00048988:neuron_enriched
      WBPaper00048988:neuron_expressed
      WBPaper00049635:dop-1(vs100)_upregulated
      WBPaper00050370:dpy-21(e428)_L3_upregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053771:up_at_24h-NaCl
      WBPaper00053771:up_at_dpy-7(e88)
      WBPaper00053888:drh-3(rrr2)_downregulated
      WBPaper00054758:alg-1(gk204)_upregulated
      WBPaper00055354:Allantoin_upregulated
      WBPaper00055354:eat-2(ad1116)_upregulated
      WBPaper00055354:Metformin_upregulated
      WBPaper00055354:Rapamycin-Metformin_upregulated
      WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
      WBPaper00055354:Rapamycin-Rifampicin_upregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055354:Rifampicin-Psora_upregulated
      WBPaper00055354:Rifampicin_upregulated
      WBPaper00056039:ptl-1(ok621)_upregulated
      WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
      WBPaper00056090:E.faecalis_upregulated_N2
      WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
      WBPaper00056826:SGP_biased
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00058948:PA14_downregulated
      WBPaper00059421:daf-1(m40);daf-3(mgDf90)_downregulated
      WBPaper00059421:daf-3(mgDf90)_downregulated
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00060921:cat-2(e1112)_upregulated
      WBPaper00060921:tdc-1(n3419)_upregulated
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061203:spr-1(ok2144)_upregulated
      WBPaper00061340:AIA
      WBPaper00061340:AIN
      WBPaper00061340:AIN_parent
      WBPaper00061340:AIY
      WBPaper00061340:ASI
      WBPaper00061340:ASK
      WBPaper00061340:ASK_parent
      WBPaper00061340:NSM_parent
      WBPaper00061377:MYRF-2_interacting
      WBPaper00061424:Diet_MYb131_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
      WBPaper00061527:F58E6.13_17427-ifa-3
      WBPaper00061651:AIY_enriched
      WBPaper00061651:NSM_enriched
      WBPaper00061753:csr-1(tor159)_upregulated_25C
      WBPaper00061995:mter-4(syb3662syb3403)_downregulated
      WBPaper00062103:neuron_enriched
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00065560:E.coli-HB101_downregulated_F3
      WBPaper00065841:63_0
      WBPaper00065841:91_0
      WBPaper00065841:102_0
      WBPaper00065841:104_0
      WBPaper00065841:112_0
      WBPaper00065841:116_0
      WBPaper00065841:125_0
      WBPaper00065975:P-body_vs_oocyte_enriched
      WBPaper00066232:ash-2(RNAi)_upregulated_WT
      WBPaper00066232:hsf-1(RNAi)_downregulated_ash-2
      cgc4489_group_17
      WBPaper00026929:Resveratrol_regulated_daf-16
      WBPaper00030839:Embryo_Pan_Neuronal
      WBPaper00030839:Larval_Pan_Neuronal
      WBPaper00031252:AIN-1_IP_enriched
      WBPaper00031252:AIN-2_IP_enriched
      WBPaper00031532:Larva_Pan_Neuronal_Enriched
      WBPaper00035084:L1_enriched_AIN-2_IP
      WBPaper00035084:L2_enriched_AIN-2_IP
      WBPaper00035084:L3_enriched_AIN-2_IP
      WBPaper00035084:L4_enriched_AIN-2_IP
      WBPaper00040985:AIN-2_asynchronous_intestine
      WBPaper00040985:AIN-2_L4_intestine
      WBPaper00041174:genotypic
      WBPaper00041174:genotypic_prime
      WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
      WBPaper00045294:50uM_DBAA_downregulated
      WBPaper00045673:colistin_upregulated
    Interaction (127)
    Anatomy_function: WBbtf0150
  Map_info (4)
  Reference (157)
  Method: Gene