WormBase Tree Display for Gene: WBGene00004301

WBGene00004301 Evidence: CGC_data_submission
  SMap: S_parent: Sequence: T24C2
  Identity: Version: 1
    Name: CGC_name: ram-5 Person_evidence: WBPerson37
      Sequence_name: T24C2.1
      Molecular_name: T24C2.1
        T24C2.1.1
        CE31070
      Other_name: CELE_T24C2.1 Accession_evidence: NDB BX284606
      Public_name: ram-5
    DB_info: Database: AceView gene XP173
        WormQTL gene WBGene00004301
        WormFlux gene WBGene00004301
        NDB locus_tag CELE_T24C2.1
        Panther gene CAEEL|WormBase=WBGene00004301|UniProtKB=G5EC82
          family PTHR22907
        NCBI gene 181550
        RefSeq protein NM_078021.5
        TREEFAM TREEFAM_ID TF315307
        TrEMBL UniProtAcc G5EC82
        UniProt_GCRP UniProtAcc G5EC82
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:34 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info (11)
  Molecular_info: Corresponding_CDS: T24C2.1
    Corresponding_CDS_history: T24C2.1:wp51
      T24C2.1:wp80
    Corresponding_transcript: T24C2.1.1
    Other_sequence: AF218866
      Oden_isotig21999
      CSC01392_1
      FD516170.1
      FK808063.1
      OOC00521_1
    Associated_feature: WBsf662393
      WBsf663566
      WBsf1007936
      WBsf236683
  Experimental_info: RNAi_result: WBRNAi00035911 Inferred_automatically: RNAi_primary
      WBRNAi00019140 Inferred_automatically: RNAi_primary
      WBRNAi00054032 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr943
      Expr1011790
      Expr1032126
      Expr1157572
      Expr2015249
      Expr2033483
    Drives_construct: WBCnstr00005059
      WBCnstr00013814
      WBCnstr00035580
    Construct_product: WBCnstr00035580
    Microarray_results (17)
    Expression_cluster: WBPaper00032031:DConiospora_upregulated_OligoArray_24h
      WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
      WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
      WBPaper00040221:DAF-12_target_ALF4
      WBPaper00040560:hpl-2_L3_downregulated
      WBPaper00042477:rsr-2(RNAi)_downregulated_TilingArray
      WBPaper00044736:oscillating_dev_expression
      WBPaper00045934:wrn-1(gk99)_downregulated
      WBPaper00046024:sleep_upregulated_oscillating
      WBPaper00048988:neuron_expressed
      WBPaper00049377:MWCNT_downregulated
      WBPaper00049545:jmjd-3.1(+)_upregulated
      WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
      WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
      WBPaper00049626:UNC-75_target
      WBPaper00050193:cec-4(ok3124)_upregulated_L1
      WBPaper00050344:AFD-neuron_enriched
      WBPaper00050344:ASER-neuron_enriched
      WBPaper00050344:PLM-neuron_enriched
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050743:elli-1(sam-3)_downregulated
      WBPaper00050801:DAF-12_dauer_regulome
      WBPaper00050801:DAF-16_dauer_regulome
      WBPaper00050801:DPY-21_dauer_regulome
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00053295:lin-22(icb38)_upregulated
      WBPaper00053295:lin-22(ot267)_upregulated
      WBPaper00053295:lin-22(ot269)_upregulated
      WBPaper00053402:cco-1(RNAi)_downregulated
      WBPaper00053810:nuo-6(qm200)_downregulated
      WBPaper00054410:set-9(rw5)_downregulated
      WBPaper00055013:hmg-3(bar24)_downregulated
      WBPaper00055013:hmg-4(RNAi)_downregulated
      WBPaper00055354:eat-2(ad1116)_upregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055386:daf-2(e1370)_upregulated
      WBPaper00055626:pry-1(mu38)_downregulated
      WBPaper00055941:nuo-6(qm200)_downregulated
      WBPaper00055971:nhl-2(ok818)_25C_downregulated
      WBPaper00056330:glycine_downregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
      WBPaper00056617:adr-1_upregulated_embryo_transcript
      WBPaper00057041:spc-1(cas971)_upregulated
      WBPaper00057041:unc-70(cas983)_upregulated
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00059117:B.subtilis_upregulated
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00060014:set-2(tm1630)_downregulated
      WBPaper00060459:bcat-1(RNAi)_upregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00061007:HB101_upregulated
      WBPaper00061007:S.aquatilis_upregulated
      WBPaper00061007:X.citri_upregulated
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061340:ADEsh
      WBPaper00061340:RIA
      WBPaper00061424:Diet_MYb120_upregulated
      WBPaper00061479:hda-1(ne4752)_upregulated
      WBPaper00061527:mlt-9_22518-F33D4.6_14044
      WBPaper00061753:csr-1(tor159)_downregulated_20C
      WBPaper00061995:mter-4(syb3662syb3403)_downregulated
      WBPaper00062103:neuron_enriched
      WBPaper00062156:jmjd-1.2(zr1010)_upregulated
      WBPaper00062156:jmjd-5(zr1234)_upregulated
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062456:doxycycline_upregulated_N2_transcript
      WBPaper00062590:Aging_downregulated_neuron
      WBPaper00062672:let-418(n3536)dcp-66(RNAi)_upregulated
      WBPaper00064005:starvation_downregulated_N2_mRNA
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064494:postdauer_downregulated_WholeAnimal
      WBPaper00064539:nhr-114(gk849)_downregulated
      WBPaper00064716:paraquat_downregulated
      WBPaper00064933:bcf-1(ylf1)_downregulated_transcript
      WBPaper00065096:25C_vs_20C_downregulated
      WBPaper00065096:Day10_vs_Day1_downregulated
      WBPaper00065746:eat-2(ad1113)_downregulated
      WBPaper00065841:82_1
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
      WBPaper00026629:L4_male_enriched
      WBPaper00026929:Resveratrol_regulated_daf-16
      WBPaper00027111:rde-3(ne298)_upregulated
      WBPaper00027111:rde-3(r459)_upregulated
      WBPaper00036130:mir-243_up_regulated
      WBPaper00036286:Pattern_G
      WBPaper00040858:eQTL_regulated_developing
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
      WBPaper00045294:0.1uM_TBBP_downregulated
      WBPaper00045673:colistin_upregulated
      WBPaper00045807:microcystin-LR_downregulated
      WBPaper00045960:L1-L4-lethargus_upregulated
      WBPaper00045960:L4-lethargus_upregulated
      WBPaper00046853:AOBr_M.aeruginosa-batch-culture_downregulated
      WBPaper00048989:N2_rapamycin_upregulated
      WBPaper00056330:mrps-5(RNAi)_upregulated
    Interaction: WBInteraction000270758
      WBInteraction000414773
  Map_info: Map: X Position: 16.7385 Error: 0.004949
    Well_ordered
    Positive: Positive_clone: T24C2 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: 2_point: 4568
      Multi_point: 1581
        4518
  Reference: WBPaper00001328
    WBPaper00003780
    WBPaper00003927
    WBPaper00004197
    WBPaper00010137
    WBPaper00013489
    WBPaper00018147
    WBPaper00019598
    WBPaper00019599
    WBPaper00023192
    WBPaper00023824
    WBPaper00023825
    WBPaper00026629
    WBPaper00027278
    WBPaper00030652
    WBPaper00030671
    WBPaper00033531
    WBPaper00039849
  Remark: Sequence connection from [Yu R]
  Method: Gene