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WormBase Tree Display for Gene: WBGene00001596

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Name Class

WBGene00001596SMapS_parentSequenceZC308
Identity (6)
Gene_info (11)
Molecular_infoCorresponding_CDSZC308.1a
ZC308.1b
ZC308.1c
ZC308.1e
ZC308.1f
Corresponding_CDS_historyZC308.1:wp90
ZC308.1d:wp270
Corresponding_transcriptZC308.1a.1
ZC308.1a.2
ZC308.1b.1
ZC308.1c.1
ZC308.1e.1
ZC308.1f.1
Other_sequence (46)
Associated_feature (25)
Experimental_infoRNAi_result (44)
Expr_pattern (12)
Drives_constructWBCnstr00003171
WBCnstr00003172
WBCnstr00036836
Construct_productWBCnstr00036836
Regulate_expr_clusterWBPaper00037611:GLD-2-associated
WBPaper00045729:gld-2(RNAi)_downregulated
WBPaper00045729:gld-2(RNAi)_upregulated
AntibodyWBAntibody00000544
WBAntibody00000545
WBAntibody00002557
WBAntibody00002763
WBAntibody00003040
Microarray_results (41)
Expression_clusterWBPaper00029359_1174
WBPaper00029359_1280
WBPaper00029359_1289
WBPaper00029359_1304
WBPaper00029359_1312
WBPaper00029359_1330
WBPaper00029359_1444
WBPaper00029359_1497
WBPaper00029359_1504
WBPaper00029359_1553
WBPaper00029359_1600
WBPaper00029359_1604
WBPaper00029359_1659
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00037946:EGL-5_interacting
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00038118:aak-2(gt33)_upregulated
WBPaper00042561:smgl-1(RNAi)_downregulated
WBPaper00044426:rotenone_24h_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_downregulated
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045521:Gender_Neutral
WBPaper00045729:gld-2(RNAi)_downregulated
WBPaper00046012:tdp-1(ok803)_downregulated
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00048910:mRNA-interacting_protein
WBPaper00048988:neuron_expressed
WBPaper00049545:cco-1(RNAi)_upregulated
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049920:Glucose-Diet_downregulated_hyl-2(tm2031)
WBPaper00049920:Glucose-Diet_downregulated_N2
WBPaper00049942:HeatShock_downregulated_hsf-1(+)
WBPaper00049942:hsf-1(RNAi)_downregulated
WBPaper00050015:ifg-1(RNAi)_upregulated
WBPaper00050234:lin-28(RNAi)_upregulated
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050522:mafr-1(tm6082)_downregulated
WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:downregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:seam_expressed
WBPaper00051039:germline_enriched
WBPaper00051310:LIN-41_interacting
WBPaper00051558:fog-2(q71)_regulated
WBPaper00053184:sma-2(rax5)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053302:alovudine_24h_regulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053302:zidovudine_24h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
WBPaper00053713:Pheromone-induced_postdauer_vs_control_upregulated
WBPaper00053713:Starvation-induced_postdauer_vs_control_downregulated
WBPaper00053814:25C_downregulated_PY79
WBPaper00055226:ADR-2_target_N2
WBPaper00055334:DLC-1_interacting
WBPaper00055648:germline_expressed
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00055897:heat-shock_downregulated
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056034:pals-22(jy3)_downregulated
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056139:soil-microbiota_upregulated
WBPaper00056290:hsp-6(mg585)_downregulated
WBPaper00056443:sek-1(km4)_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00056471:S.aureus-4h_upregulated_N2
WBPaper00056826:SGP_biased
WBPaper00057288:iff-1(RNAi)_downregulated_transcript
WBPaper00058691:sin-3(tm1276)_upregulated
WBPaper00058725:sftb-1(cer6)_upregulated
WBPaper00058725:sftb-1(cer39)_downregulated
WBPaper00058725:sftb-1(cer39)_upregulated
WBPaper00059027:neuron-synapses_enriched
WBPaper00059174:MEG-3_interacting
WBPaper00059254:CSR-1_interacting
WBPaper00059254:PRG-1_interacting
WBPaper00059471:EGL-43_interacting
WBPaper00059605:MUT-16_interacting
WBPaper00059664:srbc-48(ac23)_downregulated
WBPaper00060084:cco-1(RNAi)_upregulated_N2
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060445:nfki-1(cer1)_upregulated_L4
WBPaper00060661:sensory-neuron_depleted
WBPaper00060886:spr-5(by101);met-2(n4256)_upregulated
WBPaper00061340:hmc_and_homolog
WBPaper00061439:unc-30(ok613)_downregulated
WBPaper00061478:SUMO-conjugated_protein
WBPaper00061527:dld-1-skn-1_16701
WBPaper00061527:npp-8_2951-rme-8_3001
WBPaper00061527:npp-8_4355-afd-1_4796
WBPaper00061527:npp-8_4368-E01B7.1_7741
WBPaper00062123:DEPS-1_interacting
WBPaper00062123:GLH-1_interacting
WBPaper00062325:etr-1(lq61)_upregulated
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00062456:doxycycline_downregulated_CB4856_protein
WBPaper00062456:doxycycline_downregulated_N2_protein
WBPaper00064005:starvation_upregulated_N2_mRNA
WBPaper00064071:NHR-49_interacting
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064130:Beta-Amyloid_downregulated_protein
WBPaper00064229:B.thuringiensis-Cry5Ba_downregulated
WBPaper00065373:Cisplatin_upregulated_WT
WBPaper00065373:sek-1(km4)_downregulated_cisplatin
WBPaper00065841:41_0
WBPaper00065841:89_0
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
cgc4489_group_2
cgc4489_group_25
WBPaper00025032:cluster_38
WBPaper00025032:cluster_155
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00029437:dcr-1_downregulated
WBPaper00031003:0hr_muscle_enriched
WBPaper00031003:total_muscle_enriched
WBPaper00031252:AIN-1_IP_enriched
WBPaper00031252:AIN-2_IP_enriched
WBPaper00031532:Larva_Pan_Neuronal_Depleted
WBPaper00031832:slr-2_regulated
WBPaper00034661:AgNPs_downregulated
WBPaper00035084:embryo_enriched_AIN-2_IP
WBPaper00035084:L2_enriched_AIN-2_IP
WBPaper00035084:L3_enriched_AIN-2_IP
WBPaper00035084:L4_enriched_AIN-2_IP
WBPaper00035873:dpy-9_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00035905:FBF-1_Associated
WBPaper00036123:Cadmium_regulated
WBPaper00036286:Pattern_H
WBPaper00037611:GLD-2-associated
WBPaper00037611:RNP-8-associated
WBPaper00037695:CC_3-day
WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
WBPaper00040821:Au-NP_regulated
WBPaper00040823:alg-1(gk214)_downregulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_UVC-exposed_51h
WBPaper00042274:tbx-2(bx59)_downregulated
WBPaper00042331:a-SWCNTs_downregulated
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00046548:dafachronic-acid_downregulated
[cgc6390]:Cluster_F
[cgc6390]:intrinsic
Interaction (120)
Map_infoMapIPosition1.06665Error0.00142
Well_ordered
PositivePositive_cloneZC308Inferred_automaticallyFrom sequence, transcript, pseudogene data
ZC338
NegativeNegative_cloneC03F7
C29F10
C32G12
C38F7
C40A4
C48E7
F26B1
K04F10
K06E6Author_evidenceKadyk LC
ZC338
Mapping_data2_point5252
5253
Multi_point3683
3684
3685
Pos_neg_data5254
5255
5256
5257
5258
5259
5260
5261
5262
5263
5264
5265
5266
Reference (148)
Remarklet-606 (h292) is allelic with gld-2: 1) It fails to complement q497. 2) It maps genetically to the same position. 3) It is also rescued by ZC308 and ZC338. 4) h292 has a mutation in the gld-2 gene. See (McDowall and Rose (1977) Mol Gen Genet 255: 60-77) for a phenotypic description of h292.
[McDowall JS] Extrachromosomal arrays containing two or three cosmids generated, then manipulated genetically.
MethodGene