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WormBase Tree Display for Gene: WBGene00016445

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Name Class

WBGene00016445SMapS_parentSequenceC35D10
IdentityVersion1
NameSequence_nameC35D10.8
Molecular_nameC35D10.8
C35D10.8.1
CE29702
Other_nameCELE_C35D10.8Accession_evidenceNDBBX284603
Public_nameC35D10.8
DB_infoDatabaseAceViewgene3F945
WormQTLgeneWBGene00016445
WormFluxgeneWBGene00016445
NDBlocus_tagCELE_C35D10.8
NCBIgene183239
RefSeqproteinNM_065607.5
TREEFAMTREEFAM_IDTF317695
TrEMBLUniProtAccQ18481
UniProt_GCRPUniProtAccQ18481
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:57WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (14)
RNASeq_FPKM (74)
GO_annotation00061356
Contained_in_operonCEOP3224
OrthologWBGene00037463Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00061688Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00177186Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00219338Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00226661Brugia malayiFrom_analysisWormBase-Compara
CSP26.g1567Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g20383Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP31.g13247Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP38.g2164Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g5961Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g1215Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-C35D10.8Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold593.g5185Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00455.g11602Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_21472Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_010007Caenorhabditis remaneiFrom_analysisWormBase-Compara
Pan_g8996Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30060520Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIII_pilon.g7563Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00244686Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00304731Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00257599Strongyloides rattiFrom_analysisWormBase-Compara
ParalogWBGene00008141Caenorhabditis elegansFrom_analysisTreeFam
WBGene00021358Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC35D10.8
Corresponding_transcriptC35D10.8.1
Other_sequenceCBC04092_1
Associated_featureWBsf992231
WBsf224812
Experimental_infoRNAi_resultWBRNAi00011665Inferred_automaticallyRNAi_primary
WBRNAi00062149Inferred_automaticallyRNAi_primary
WBRNAi00067805Inferred_automaticallyRNAi_primary
WBRNAi00094927Inferred_automaticallyRNAi_primary
WBRNAi00029584Inferred_automaticallyRNAi_primary
WBRNAi00005887Inferred_automaticallyRNAi_primary
WBRNAi00041991Inferred_automaticallyRNAi_primary
WBRNAi00005607Inferred_automaticallyRNAi_primary
Expr_patternExpr1026413
Expr1037050
Expr1146000
Expr2001446
Expr2019669
Drives_constructWBCnstr00028064
Construct_productWBCnstr00028064
Microarray_results (17)
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00033065:cyc-1(RNAi)_downregulated
WBPaper00042561:smg-2(RNAi)_upregulated
WBPaper00044037:eat-2_upregulated
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044616:alg-3-4_upregulated_gene
WBPaper00044656:tatn-1(qd182)_downregulated
WBPaper00044736:rising_dev_expression
WBPaper00044760:germline_specific
WBPaper00045521:Spermatogenic
WBPaper00048690:hermaphrodite-Z1-Z4-daughter_enriched
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
WBPaper00049942:HeatShock_downregulated_hsf-1(RNAi)
WBPaper00049942:hsf-1(RNAi)_downregulated
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050990:arcade_intestinal-valve_enriched
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00052884:emb-4(hc60)_downregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053308:SMG-2_associated_NMD(-)_upregulated_ClassI
WBPaper00053599:female_vs_male_downregulated
WBPaper00053599:oocyte_vs_mitosis_upregulated
WBPaper00053810:isp-1(qm150)_downregulated
WBPaper00055354:Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Metformin_upregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055482:pmt-2(RNAi)_upregulated
WBPaper00055648:sperm_expressed
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056161:male_enriched_siRNA
WBPaper00056290:hsp-6(mg585)_downregulated
WBPaper00056826:SGP_biased
WBPaper00058711:wdr-5(ok1417)_downregulated
WBPaper00058725:sftb-1(cer6)_upregulated
WBPaper00060014:set-2(tm1630)_upregulated
WBPaper00060014:set-2(zr2012)_upregulated
WBPaper00060661:sensory-neuron_depleted
WBPaper00060909:atfs-1(cmh15)_upregulated
WBPaper00061203:let-418(n3536)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061340:RIM_parent
WBPaper00061341:28C_24h_downregulated
WBPaper00061341:28C_48h_downregulated
WBPaper00061466:nath-10(icb99)_upregulated
WBPaper00061527:sfxn-1.4-K11H3.2
WBPaper00062146:MOG-7-degron_1h_regulated
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064315:mrg-1(qa6200)_downregulated_PGCs
WBPaper00064494:postdauer_upregulated_AWA
WBPaper00064539:nhr-114(gk849)_downregulated
WBPaper00064716:paraquat_downregulated
WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065158:AFD_enriched
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066085:hda-3(ok1991)_upregulated
WBPaper00066110:Doxorubicin_upregulated_diploid
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
WBPaper00066232:ash-2(RNAi)_downregulated_WT
cgc4489_group_11
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026980:intestine_enriched
WBPaper00035905:FBF-1_Associated
WBPaper00036286:Pattern_H
WBPaper00038172:aak-2overexpression_up_regulated
WBPaper00038172:tax-6null_down_regulated
WBPaper00039866:ClassComp_daf-19_upregulated
WBPaper00040963:TA300_up
WBPaper00045263:0.1mM-paraquat_downregulated
WBPaper00045263:isp-1(qm150)_downregulated
WBPaper00045263:nuo-6(qm200)_downregulated
WBPaper00045263:ProLongevity-mtROS_downregulated
WBPaper00053550:daf-19(m86)_upregulated_3-fold-embryo
[cgc5767]:cluster_2
[cgc5767]:expression_class_E
[cgc5767]:expression_class_E_pi(101_min)
[cgc5767]:expression_class_SE
[cgc5767]:expression_class_SE_pi(101_min)
[cgc6390]:intrinsic
InteractionWBInteraction000007259
WBInteraction000521127
WBInteraction000548894
Map_infoPositivePositive_cloneC35D10Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIII-2.41699
MethodGene