WormBase Tree Display for Gene: WBGene00011500

WBGene00011500 SMap: S_parent: Sequence: T05G5
  Identity: Version: 1
    Name: Sequence_name: T05G5.5
      Molecular_name (12)
      Other_name: CELE_T05G5.5 Accession_evidence: NDB BX284603
      Public_name: T05G5.5
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (37)
    RNASeq_FPKM (74)
    GO_annotation (11)
    Contained_in_operon: CEOP3616
    Ortholog: WBGene00031493 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00055034 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00163214 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00130175 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00118106 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00225853 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g4120 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g3976 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g8173 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g9690 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g16880 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g20216 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g6333 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g5726 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g76 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g3435 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_02410.g17159 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-T05G5.5 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g9323 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00071.g3340 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_23732 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_009503 Caenorhabditis remanei From_analysis: WormBase-Compara
      Pan_g22502 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30199600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g8693 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00244799 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00262183 Strongyloides ratti From_analysis: WormBase-Compara
      SGD:S000002604 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0037469 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-060825-226 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:26238 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1915337 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1359211 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
    Paralog: WBGene00022031 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable dephospho-CoA kinase activity. Predicted to be involved in coenzyme A biosynthetic process. Located in mitochondrion. Is an ortholog of human DCAKD (dephospho-CoA kinase domain containing). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T05G5.5a
      T05G5.5b
      T05G5.5c
      T05G5.5d
    Corresponding_transcript: T05G5.5a.1
      T05G5.5b.1
      T05G5.5c.1
      T05G5.5d.1
    Other_sequence: HCC09050_1
      Acan_isotig12361
      CJC02863_1
      CBC01711_1
      Dviv_isotig12358
      HC08300
      Dviv_isotig12359
    Associated_feature: WBsf651401
      WBsf666481
      WBsf666482
      WBsf667321
      WBsf667322
      WBsf993789
      WBsf993790
      WBsf227358
      WBsf227359
      WBsf227360
  Experimental_info: RNAi_result: WBRNAi00006173 Inferred_automatically: RNAi_primary
      WBRNAi00052564 Inferred_automatically: RNAi_primary
      WBRNAi00035228 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr9530
      Expr1013848
      Expr1035063
      Expr1156183
      Expr2005900
      Expr2024116
    Drives_construct: WBCnstr00030608
    Construct_product: WBCnstr00014095
      WBCnstr00030608
    Microarray_results (21)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:hypodermis_larva_enriched
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00040560:hpl-2_embryo_downregulated
      WBPaper00044501:gld-1_let-7_regulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045521:Gender_Neutral
      WBPaper00046509:htz-1(ok3099)_upregulated
      WBPaper00048923:Aging_regulated
      WBPaper00048926:miaserin_upregulated_adult-day5
      WBPaper00048988:neuron_expressed
      WBPaper00050344:AFD-neuron_enriched
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051404:alg-1(gk214)_downregulated
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053388:dauer_regulated_Cluster3
      WBPaper00053810:daf-2(e1370)_upregulated
      WBPaper00053810:isp-1(qm150)_upregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
      WBPaper00055354:Rapamycin-Rifampicin_upregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00056809:smn-1(ok355)_downregulated
      WBPaper00057288:iff-1(RNAi)_upregulated_transcript
      WBPaper00059253:sucrose_upregulated
      WBPaper00059356:set-6(ok2195)_baz-2(tm0235)_regulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00061340:ADF
      WBPaper00061340:ADL
      WBPaper00061340:ASG
      WBPaper00061340:ASH
      WBPaper00061340:ASI
      WBPaper00061340:ASJ
      WBPaper00061340:ASK
      WBPaper00061340:AWA
      WBPaper00061340:AWB
      WBPaper00061340:AWC
      WBPaper00061527:lpd-2-EEED8.16
      WBPaper00061651:ADF_enriched
      WBPaper00061651:ADL_enriched
      WBPaper00061651:ASG_enriched
      WBPaper00061651:ASH_enriched
      WBPaper00061651:ASI_enriched
      WBPaper00061651:ASJ_enriched
      WBPaper00061651:ASK_enriched
      WBPaper00061651:AWB_enriched
      WBPaper00061651:AWC_OFF_enriched
      WBPaper00061651:PHA_enriched
      WBPaper00061651:PHB_enriched
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062590:Aging_downregulated_hypodermis
      WBPaper00062590:Aging_upregulated_neuron
      WBPaper00062669:extracellular-vesicle_protein
      WBPaper00064005:starvation_upregulated_N2_mRNA
      WBPaper00064071:NHR-49_interacting
      WBPaper00064716:paraquat_upregulated
      WBPaper00064933:bcf-1(ylf1)_downregulated_transcript
      WBPaper00065120:body-muscle-transcriptome
      cgc4386_cluster_4_4
      WBPaper00024671:AFD_AWB_vs_unsorted_upregulated
      WBPaper00025032:cluster_1
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00030839:Embryo_Pan_Neuronal
      WBPaper00030839:Larval_Pan_Neuronal
      WBPaper00030985:Erwinia_carotovora_upregulated
      WBPaper00031003:0hr_muscle_depleted
      WBPaper00031003:total_muscle_depleted
      WBPaper00031532:Larva_Pan_Neuronal_Enriched
      WBPaper00035905:FBF-1_Associated
      WBPaper00036123:Atrazine_regulated
      WBPaper00036286:Pattern_F
      WBPaper00039866:ClassComp_daf-19_downregulated
      WBPaper00040210:Diazinon_24C_regulated
      WBPaper00041606:CE_B.thuringiensis-DB27_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00045263:isp-1(qm150)_upregulated
      WBPaper00045263:nuo-6(qm200)_upregulated
      WBPaper00047070:N2_UV_downregulated
      WBPaper00048637:lin-35(n745)_starvation_downregulated
      WBPaper00053236:Starvation_regulated_N2
      WBPaper00053550:daf-19(m86)_downregulated_3-fold-embryo
      [cgc5767]:cluster_1
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_MD
      [cgc5767]:expression_class_MD_pd(53_min)
      [cgc5767]:expression_class_SM
      [cgc5767]:expression_class_SMD
    Interaction (30)
  Map_info: Positive: Positive_clone: T05G5 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III 0.972542
  Reference: WBPaper00038444
    WBPaper00038491
    WBPaper00055090
  Method: Gene