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WormBase Tree Display for Gene: WBGene00021466

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Name Class

WBGene00021466SMapS_parentSequenceY39G10AR
IdentityVersion2
NameCGC_nameeif-2gammaPerson_evidenceWBPerson2266
Sequence_nameY39G10AR.8
Molecular_nameY39G10AR.8
Y39G10AR.8.1
CE27254
Other_nameCELE_Y39G10AR.8Accession_evidenceNDBBX284601
Public_nameeif-2gamma
DB_infoDatabase (13)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:04WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
209 Jan 2017 15:00:31WBPerson2970Name_changeCGC_nameeif-2gamma
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classeif
Allele (39)
StrainWBStrain00001446
RNASeq_FPKM (74)
GO_annotation (12)
Ortholog (42)
Paralog (17)
Structured_descriptionAutomated_descriptionPredicted to enable translation initiation factor activity. Predicted to contribute to tRNA binding activity. Predicted to be involved in formation of translation preinitiation complex. Predicted to be part of eukaryotic translation initiation factor 2 complex. Expressed in tail. Human ortholog(s) of this gene implicated in MEHMO syndrome. Is an ortholog of human EIF2S3 (eukaryotic translation initiation factor 2 subunit gamma) and EIF2S3B (eukaryotic translation initiation factor 2 subunit gamma B).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0060801Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:3267)
Molecular_infoCorresponding_CDSY39G10AR.8
Corresponding_transcriptY39G10AR.8.1
Other_sequence (79)
Associated_featureWBsf643091
WBsf982847
WBsf982848
WBsf982849
WBsf1009319
WBsf217295
WBsf217296
Experimental_infoRNAi_result (34)
Expr_patternChronogram1037
Expr6958
Expr1029048
Expr1039379
Expr1159764
Expr2011251
Expr2029487
Drives_constructWBCnstr00002328
WBCnstr00024543
Construct_productWBCnstr00024543
Microarray_resultsSMD_Y39G10A_246.C
SMD_Y39G10A_246.H
176446_s_at
A_12_P104518
Aff_Y39G10A_246.C
GPL13394_WBGene00021466
GPL13914_Y39G10AR.8
GPL14144_Y39G10AR.8_1132-1191_0.943_2_B
GPL14144_Y39G10AR.8_1147-1206_0.933_3_C
GPL14144_Y39G10AR.8_1151-1210_0.950_1_A
GPL19516_CGZ0045003
GPL21109_Y39G10AR.8
GPL3518_CE27254
GPL8304_CE_WBGene00021466_A
GPL8304_CE_WBGene00021466_B
GPL8673_Y39G10AR_8P00258
GPL8673_Y39G10AR_8P00720
GPL8673_Y39G10AR_8P01313
GPL9450_Y39G10AR.8
cea2.p.20692
Expression_clusterWBPaper00028451:Oogenic_protein
WBPaper00031040:TGF-beta_adult_downregulated
WBPaper00033070:Elbe_upregulated
WBPaper00037047:insoluble_protein
WBPaper00037946:LIN-39_interacting
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:bodywall-muscle_larva_enriched
WBPaper00037950:bodywall-muscle_larva_SelectivelyEnriched
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038118:aak-2(gt33)_upregulated
WBPaper00038289:oocyte_protein
WBPaper00044128:daf-2(e1370)_downregulated
WBPaper00044656:tatn-1(qd182)_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00044746:aging_downregulated_HeatShock
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045521:Gender_Neutral
WBPaper00045774:clk-1_downregulated
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00048810:CoQ-deficiency_downregulated
WBPaper00048988:neuron_expressed
WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
WBPaper00050599:nicotine(0.01mM)_upregulated
WBPaper00050686:glp-1(e2141)_downregulated
WBPaper00050698:DEP-1_interacting
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:seam_expressed
WBPaper00051039:germline_enriched
WBPaper00051245:body-wall-muscle_cytoplasm_expressed
WBPaper00051245:epidermis_cytoplasm_expressed
WBPaper00051245:epidermis_nucleus_expressed
WBPaper00051245:intestine_cytoplasm_expressed
WBPaper00051245:intestine_nucleus_expressed
WBPaper00051245:pharyngeal-muscle_cytoplasm_expressed
WBPaper00051311:VGLN-1-interacting
WBPaper00051558:aging_regulated
WBPaper00053184:sma-2(rax5)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053289:DREAM-target
WBPaper00053302:zidovudine_24h_regulated
WBPaper00053388:dauer_regulated_Cluster6
WBPaper00053810:clk-1(qm30)_downregulated
WBPaper00053810:daf-2(e1370)_downregulated
WBPaper00053810:isp-1(qm150)_downregulated
WBPaper00053810:nuo-6(qm200)_downregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055648:germline_expressed
WBPaper00055827:daf-2(e1370)_downregulated
WBPaper00056034:pals-22(jy3)_downregulated
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056471:S.aureus-4h_downregulated_N2
WBPaper00056826:SGP_biased
WBPaper00057288:Cold_downregulated_protein
WBPaper00057288:iff-1(RNAi)_downregulated_transcript
WBPaper00058598:sin-3(tm1276)_upregulated
WBPaper00058691:cfp-1(tm6369)_upregulated
WBPaper00058691:CFP-1_interacting_protein
WBPaper00059254:CSR-1_interacting
WBPaper00059356:BAZ-2_SET-6_interacting
WBPaper00059605:MUT-16_interacting
WBPaper00061045:Y56A3A.22(cck200)_downregulated
WBPaper00061203:sin-3(tm1276)_downregulated
WBPaper00061341:28C_24h_downregulated
WBPaper00061377:MYRF-1_interacting
WBPaper00061478:SUMO-conjugated_protein
WBPaper00061527:hars-1-cct-4_20449
WBPaper00062159:hda-2(ok1479)_downregulated
WBPaper00062498:PPM-1.D_interacting
WBPaper00062554:MAGU-2_interacting
WBPaper00062590:Aging_downregulated_hypodermis
WBPaper00062669:extracellular-vesicle_protein
WBPaper00064005:starvation_upregulated_N2_mRNA
WBPaper00064071:NHR-49_interacting
WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064201:SNA-3_interacting
WBPaper00064315:mrg-1(qa6200)_downregulated_PGCs
WBPaper00064716:paraquat_upregulated
WBPaper00065120:body-muscle-transcriptome
WBPaper00065158:AFD_depleted
WBPaper00065975:P-body_vs_oocyte_depleted
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
cgc4489_group_3
cgc4489_group_16
WBPaper00025032:cluster_15
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00030985:Photorhabdus_luminescens_upregulated
WBPaper00031832:slr-2_regulated
WBPaper00032948:FedUp
WBPaper00035479:daf-16(RNAi)_upregulated
WBPaper00036123:Atrazine_regulated
WBPaper00036286:Pattern_H
WBPaper00037695:WC_5-day
WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2down
WBPaper00040426:CYD-1_CDK-4_downregulated
WBPaper00041606:CE_B.thuringiensis-DB27_regulated
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_UVC-EtBr-exposed_24h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00045263:isp-1(qm150)_downregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
[cgc5767]:cluster_8
[cgc5767]:expression_class_M
[cgc5767]:expression_class_SM
[cgc6390]:intrinsic
Interaction (290)
Map_infoMapIPosition-9.39239
PositivePositive_cloneY39G10ARInferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00027281
WBPaper00029435
WBPaper00038491
WBPaper00055090
WBPaper00061547
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene