WormBase Tree Display for Gene: WBGene00020096

WBGene00020096 SMap: S_parent: Sequence: R144
  Identity: Version: 2
    Name: Sequence_name: R144.6
      Molecular_name: R144.6
        R144.6.1
        CE37549
      Other_name: CELE_R144.6 Accession_evidence: NDB BX284603
      Public_name: R144.6
    DB_info: Database: AceView gene 3G94
        WormQTL gene WBGene00020096
        WormFlux gene WBGene00020096
        NDB locus_tag CELE_R144.6
        Panther gene CAEEL|WormBase=WBGene00020096|UniProtKB=Q10000
          family PTHR16119
        NCBI gene 175678
        RefSeq protein NM_065661.8
        SwissProt UniProtAcc Q10000
        TREEFAM TREEFAM_ID TF313673
        UniProt_GCRP UniProtAcc Q10000
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:02 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 21 Sep 2004 09:03:33 WBPerson1867 Event: Split_into: WBGene00043060
      Split_into: WBGene00043060
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (19)
    RNASeq_FPKM (74)
    GO_annotation: 00055835
      00055836
      00124806
      00124807
      00124808
    Contained_in_operon: CEOP3252
    Ortholog (33)
    Paralog: WBGene00009876 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00010637 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00011829 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00012293 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00020933 Caenorhabditis elegans From_analysis: Inparanoid_8
            Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable carbohydrate transmembrane transporter activity. Predicted to be involved in carbohydrate transmembrane transport. Predicted to be located in membrane. Is an ortholog of human TMEM144 (transmembrane protein 144). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R144.6
    Corresponding_CDS_history: R144.6:wp131
    Corresponding_transcript: R144.6.1
    Other_sequence (23)
    Associated_feature: WBsf226626
      WBsf226627
  Experimental_info: RNAi_result: WBRNAi00017862 Inferred_automatically: RNAi_primary
      WBRNAi00005297 Inferred_automatically: RNAi_primary
      WBRNAi00051961 Inferred_automatically: RNAi_primary
      WBRNAi00006805 Inferred_automatically: RNAi_primary
      WBRNAi00051962 Inferred_automatically: RNAi_primary
      WBRNAi00033511 Inferred_automatically: RNAi_primary
      WBRNAi00062345 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1016214
      Expr1038735
      Expr1155606
      Expr2005650
      Expr2023866
    Drives_construct: WBCnstr00025374
    Construct_product: WBCnstr00025374
    Microarray_results: SMD_R144.6
      194227_x_at
      A_12_P101828
      GPL13394_WBGene00020096
      GPL13914_R144.6
      GPL14144_R144.6_145-204_0.897_12_C
      GPL14144_R144.6_247-306_0.904_9_B
      GPL14144_R144.6_568-627_0.930_4_A
      GPL19516_CGZ0032258
      GPL21109_R144.6
      GPL3518_CE26980
      GPL8304_CE_WBGene00020096_A
      GPL8673_R144_6P00061
      GPL8673_R144_6P00419
      GPL8673_R144_6P00971
    Expression_cluster: WBPaper00031011:calmodulin_binding_protein
      WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00038168:lin-15B(n744)_upregulated
      WBPaper00038168:lin-35_upregulated
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044656:tatn-1(qd182)_downregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00044760:germline_specific
      WBPaper00045420:fertilization_upregulated_protein
      WBPaper00045521:Oogenic
      WBPaper00045974:NSM_enriched_totalRNA_RNAseq
      WBPaper00048923:Aging_regulated
      WBPaper00048988:daf-2(e1370)_downregulated_neuron
      WBPaper00048988:daf-16(mu86)_upregulated_neuron
      WBPaper00048988:neuron_expressed
      WBPaper00049545:cco-1(RNAi)_downregulated
      WBPaper00049545:jmjd-3.1(+)_downregulated
      WBPaper00049942:hsf-1(RNAi)_downregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050990:intestine_enriched
      WBPaper00050990:intestine_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051311:VGLN-1-interacting
      WBPaper00052884:emb-4(hc60)_downregulated
      WBPaper00053184:sma-2(rax5)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053388:dauer_regulated_Cluster3
      WBPaper00053599:female_vs_male_upregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055648:germline_expressed
      WBPaper00055862:antimycin_damt-1(gk961032)_regulated
      WBPaper00055971:nhl-2(ok818)_25C_upregulated
      WBPaper00056034:pals-22(jy3)_downregulated
      WBPaper00056161:hermaphrodite_enriched_siRNA
      WBPaper00057288:iff-1(RNAi)_upregulated_transcript
      WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
      WBPaper00061007:S.aquatilis_downregulated
      WBPaper00061340:Coelomocyte
      WBPaper00061527:pch-2-B0393.3
      WBPaper00062325:muscle_enriched_coding-RNA
      WBPaper00062669:extracellular-vesicle_protein
      WBPaper00064716:paraquat_upregulated
      WBPaper00065096:25C_vs_20C_upregulated
      WBPaper00065096:Day10_vs_Day1_upregulated
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00025032:cluster_77
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00035905:FBF-1_Associated
      WBPaper00041606:CE_S.marcescens_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00045263:0.1mM-paraquat_upregulated
      WBPaper00045263:isp-1(qm150)_upregulated
      WBPaper00045263:nuo-6(qm200)_upregulated
      WBPaper00045263:ProLongevity-mtROS_upregulated
      WBPaper00048989:N2_rapamycin_downregulated
      WBPaper00053236:Starvation_regulated_GR1307
      [cgc6390]:Cluster_E
      [cgc6390]:mixed_oogenesis-somatic
    Interaction: WBInteraction000368583
      WBInteraction000428323
      WBInteraction000541518
      WBInteraction000556433
  Map_info: Positive: Positive_clone: R144 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III -2.24928
  Reference: WBPaper00038491
    WBPaper00055090
  Method: Gene