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WormBase Tree Display for Gene: WBGene00008606

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Name Class

WBGene00008606SMapS_parentSequenceF09B12
IdentityVersion3
NameCGC_namedhhc-1Person_evidenceWBPerson1997
Sequence_nameF09B12.2
Molecular_nameF09B12.2
F09B12.2.1
CE17644
Other_nameCELE_F09B12.2Accession_evidenceNDBBX284606
Public_namedhhc-1
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:49WBPerson1971EventImportedInitial conversion from CDS class of WS125
218 Apr 2008 09:32:24WBPerson2970Name_changeCGC_namedhhc-1
310 Jun 2014 12:12:12WBPerson1983EventAcquires_mergeWBGene00008608
Acquires_mergeWBGene00008608
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdhhc
Allele (54)
StrainWBStrain00037101
WBStrain00035001
RNASeq_FPKM (74)
GO_annotation (12)
Ortholog (40)
Paralog (12)
Structured_descriptionAutomated_descriptionPredicted to enable protein-cysteine S-palmitoyltransferase activity. Predicted to be involved in protein targeting to membrane. Predicted to be located in Golgi apparatus and endoplasmic reticulum. Is an ortholog of human ZDHHC24 (zinc finger DHHC-type containing 24).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF09B12.2
Corresponding_transcriptF09B12.2.1
Other_sequence (31)
Associated_featureWBsf671335
WBsf1008091
WBsf1008092
WBsf1024509
WBsf238291
WBsf238292
Transcription_factorWBTranscriptionFactor000981
Experimental_infoRNAi_resultWBRNAi00103713Inferred_automaticallyRNAi_primary
WBRNAi00044074Inferred_automaticallyRNAi_primary
WBRNAi00103725Inferred_automaticallyRNAi_primary
WBRNAi00103736Inferred_automaticallyRNAi_primary
WBRNAi00103718Inferred_automaticallyRNAi_primary
WBRNAi00030686Inferred_automaticallyRNAi_primary
WBRNAi00103730Inferred_automaticallyRNAi_primary
WBRNAi00012946Inferred_automaticallyRNAi_primary
WBRNAi00103696Inferred_automaticallyRNAi_primary
Expr_patternExpr1017185
Expr1033749
Expr1148040
Expr1200286
Expr2010880
Expr2029119
Drives_constructWBCnstr00032833
Construct_productWBCnstr00022544
WBCnstr00022550
WBCnstr00032833
Microarray_resultsSMD_F09B12.2
180547_at
A_12_P108180
Aff_F09B12.2
GPL13394_WBGene00008606
GPL13914_F09B12.2
GPL14144_F09B12.2_492-551_0.922_1_A
GPL14144_F09B12.2_527-586_0.918_3_C
GPL14144_F09B12.2_663-722_0.914_6_B
GPL19516_CGZ0015038
GPL21109_F09B12.2
GPL3518_CE17644
GPL8304_CE_WBGene00008606_A
GPL8673_F09B12_2P00135
GPL8673_F09B12_2P00457
GPL8673_F09B12_2P00819
GPL9450_F09B12.2
cea2.p.139478
Expression_clusterWBPaper00033065:cyc-1(RNAi)_downregulated
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00037682:sma-2_sma-4_upregulated
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00040420:FLP_enriched
WBPaper00041071:spe-44_downregulated
WBPaper00044030:nhr-8(hd117)_upregulated
WBPaper00044736:flat_dev_expression
WBPaper00045521:Oogenic
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_6h
WBPaper00048923:Aging_regulated
WBPaper00048988:neuron_expressed
WBPaper00049942:hsf-1(RNAi)_upregulated
WBPaper00050344:AFD-neuron_enriched
WBPaper00050370:dpy-21(e428)_L3_upregulated
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050990:intestine_enriched
WBPaper00050990:intestine_expressed
WBPaper00051039:germline_enriched
WBPaper00052884:emb-4(hc60)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053321:lin-15B(RNAi)_downregulated_starved-L1_Truseq
WBPaper00053388:dauer_regulated_Cluster4
WBPaper00053599:female_vs_male_upregulated
WBPaper00053599:mitosis_vs_meiosis_downregulated
WBPaper00053599:oocyte_vs_mitosis_downregulated
WBPaper00055354:Rifampicin-Psora_downregulated
WBPaper00056167:ifo-1(kc2)_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056471:S.aureus-4h_downregulated_N2
WBPaper00056826:hmc_biased
WBPaper00057288:Cold_downregulated_transcript
WBPaper00057288:iff-1(RNAi)_downregulated_transcript
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00059356:BAZ-2_SET-6_interacting
WBPaper00059471:EGL-43_interacting
WBPaper00059763:neuron_expressed
WBPaper00059895:wounding_upregulated
WBPaper00059987:Wounding_upregulated
WBPaper00060100:SiNP_upregulated_mRNA
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060764:swsn-1(os22ts)_downregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061340:Body_wall_muscle
WBPaper00061340:g2_parent
WBPaper00061340:GLR
WBPaper00061340:I1_parent
WBPaper00061340:M4_parent
WBPaper00061340:Parent_of_MI_pm1DR
WBPaper00061466:nath-10(icb99)_downregulated
WBPaper00061527:utx-1_2886-swan-1_2192
WBPaper00062159:hda-2(ok1479)_downregulated
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00064005:starvation_downregulated_N2_mRNA
WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064229:B.thuringiensis-Cry5Ba_downregulated
WBPaper00064315:mes-4(bn73)_upregulated_EGCs
WBPaper00064716:paraquat_upregulated
WBPaper00065993:glp-1(e2141)_downregulated
cgc4386_cluster_4_3
cgc4489_group_20
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00029437:dcr-1_upregulated
WBPaper00030839:Embryo_Pan_Neuronal
WBPaper00031003:0hr_muscle_enriched
WBPaper00031003:total_muscle_enriched
WBPaper00032165:differentially_expressed_with_age_medoid_1
WBPaper00032948:FedUp
WBPaper00035084:embryo_enriched_AIN-2_IP
WBPaper00035084:L1_enriched_AIN-2_IP
WBPaper00035084:L3_enriched_AIN-2_IP
WBPaper00037695:WC_5-day
WBPaper00038231:Cry5B_1.5-fold_upregulated
WBPaper00038231:Cry5B_2-fold_upregulated
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00045263:isp-1(qm150)_upregulated
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00045263:ProLongevity-mtROS_upregulated
WBPaper00050538:Fasting_upregulated
WBPaper00050538:Fasting_upregulated_cholesterol-dependent
[cgc5767]:expression_class_E
[cgc5767]:expression_class_E_pi(23_min)
[cgc5767]:expression_class_M
[cgc5767]:expression_class_ME
Interaction (41)
Map_infoMapXPosition21.8988Error0.026825
PositivePositive_cloneF09B12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00045834
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
[140610 pad] Gene was missing Acquires_merge Event history data so inferred from Acquires_merge tag.
MethodGene