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WormBase Tree Display for Gene: WBGene00007679

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Name Class

WBGene00007679SMapS_parentSequenceC18D11
IdentityVersion1
NameSequence_nameC18D11.1
Molecular_nameC18D11.1
C18D11.1.1
CE18512
Other_nameCELE_C18D11.1Accession_evidenceNDBBX284603
Public_nameC18D11.1
DB_infoDatabaseAceViewgene3M907
WormQTLgeneWBGene00007679
WormFluxgeneWBGene00007679
NDBlocus_tagCELE_C18D11.1
PanthergeneCAEEL|WormBase=WBGene00007679|UniProtKB=Q9XTZ4
familyPTHR36694
NCBIgene176611
RefSeqproteinNM_001383004.2
TREEFAMTREEFAM_IDTF321512
TrEMBLUniProtAccQ9XTZ4
UniProt_GCRPUniProtAccQ9XTZ4
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:48WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (67)
RNASeq_FPKM (74)
GO_annotation00101381
Ortholog (31)
Structured_descriptionAutomated_descriptionPredicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC18D11.1
Corresponding_transcriptC18D11.1.1
Other_sequence (38)
Associated_featureWBsf659588
WBsf716755
WBsf717113
WBsf225862
WBsf225863
Experimental_infoRNAi_resultWBRNAi00010998Inferred_automaticallyRNAi_primary
WBRNAi00040922Inferred_automaticallyRNAi_primary
WBRNAi00029067Inferred_automaticallyRNAi_primary
WBRNAi00006319Inferred_automaticallyRNAi_primary
Expr_patternExpr1023484
Expr1033315
Expr1144967
Expr2000969
Expr2019189
Drives_constructWBCnstr00033559
Construct_productWBCnstr00033559
Microarray_resultsSMD_C18D11.1
SMD_C18D11.2
173164_s_at
183350_at
A_12_P103933
Aff_C18D11.1
GPL13394_WBGene00007679
GPL13914_C18D11.1
GPL14144_C18D11.1_157-216_0.891_9_B
GPL14144_C18D11.1_250-309_0.866_16_C
GPL14144_C18D11.1_565-624_0.906_5_A
GPL19516_CGZ0005368
GPL21109_C18D11.1
GPL3518_CE18512
GPL8304_CE_WBGene00007679_A
GPL8304_CE_WBGene00007679_B
GPL8673_C18D11_1P00008
GPL8673_C18D11_1P00091
GPL8673_C18D11_1P00282
GPL9450_C18D11.1
cea2.p.57667
Expression_clusterWBPaper00031040:TGF-beta_adult_upregulated
WBPaper00032528:L3_enriched
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00033070:Elbe_upregulated
WBPaper00037946:MAB-5_interacting
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:germline-precursors_embryo_enriched
WBPaper00037950:germline-precursors_embryo_SelectivelyEnriched
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:hypodermis_larva_enriched
WBPaper00037950:hypodermis_larva_SelectivelyEnriched
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00044260:1-methylnicotinamide_upregulated
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044501:gld-1_let-7_regulated
WBPaper00044736:flat_dev_expression
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00045417:128Q-huntingtin_downreglated
WBPaper00045521:Gender_Neutral
WBPaper00046121:ecdoderm_unique
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00047131:daf-2(e1370)_upregulated_N2-background
WBPaper00048988:daf-2(e1370)_upregulated_neuron
WBPaper00049498:npr-1(ur89)_regulated_3
WBPaper00049635:dop-1(vs100)_upregulated
WBPaper00049942:HeatShock_upregulated_hsf-1(+)
WBPaper00050344:PLM-neuron_enriched
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050990:hypodermis_enriched
WBPaper00050990:hypodermis_expressed
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053302:alovudine_24h_regulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053302:stavudine_72h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053388:dauer_regulated_Cluster4
WBPaper00053615:SMO-1_target
WBPaper00054758:alg-1(gk204)_upregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Psora_downregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
WBPaper00055354:Rapamycin_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055386:daf-2(e1370)_upregulated
WBPaper00055482:pmt-2(RNAi)_upregulated
WBPaper00055482:Tunicamycin_downregulated
WBPaper00055648:male-vas-deferens_expressed
WBPaper00055897:heat-shock_upregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056161:hermaphrodite_enriched_siRNA
WBPaper00056284:ints-6(t1903)_downregulated
WBPaper00056284:ints-9(RNAi)_downregulated
WBPaper00056330:glycine_downregulated
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00056471:S.aureus-4h_downregulated_N2
WBPaper00056826:SGP_biased
WBPaper00057140:meg-3(tm4259)_meg-4(ax2026)_downregulated
WBPaper00057154:HeatShock_downregulated_miRNA-target
WBPaper00057154:HeatShock_upregulated_mRNA
WBPaper00057161:meg-3(tm4259)_meg-4(ax2026)_downregulated_endo-siRNA_targets
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058958:100mGy-irradiation-72h_upregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059728:5ug_cholesterol_upregulated
WBPaper00059728:20ug_cholesterol_upregulated
WBPaper00059763:neuron_expressed
WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
WBPaper00060014:set-2(tm1630)_downregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060661:sensory-neuron_enriched
WBPaper00060683:hlh-11(ko1)_upregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061340:AMso
WBPaper00061340:B_F_K_Kp_U_Y
WBPaper00061340:hyp4_hyp5_hyp6
WBPaper00061340:Hypodermis
WBPaper00061340:P_cell
WBPaper00061340:Tail_hypodermis
WBPaper00061340:Y
WBPaper00061341:28C_24h_upregulated
WBPaper00061439:unc-30(ok613)_upregulated
WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
WBPaper00061527:F54D5.3_7003-F54D5.3_7004
WBPaper00061527:lon-8-C18D11.1_11630
WBPaper00061995:mter-4(syb3662syb3403)_downregulated
WBPaper00062056:dpl-1(n2994)_downregulated
WBPaper00062056:lin-15B(we23)_downregulated
WBPaper00062056:lin-36(we31)_downregulated
WBPaper00062056:lin-37(n758)_downregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00064071:NHR-49_interacting
WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064229:B.thuringiensis-Cry5Ba_upregulated
WBPaper00064306:Agaro-oligosaccharides_upregulated
WBPaper00064721:fasn-1(g14)_downregulated_starved
WBPaper00064769:him-17(me24)_upregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065120:body-muscle-transcriptome
WBPaper00065158:25C_vs_15C_upregulated_AFD
WBPaper00065581:hpk-1(pk1393)_upregulated
WBPaper00065841:5_1
WBPaper00065841:30_1
WBPaper00065841:30_2
WBPaper00065841:34_0
WBPaper00065841:64_0
WBPaper00065841:82_1
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
cgc4386_cluster_4_6
cgc4489_group_18
WBPaper00025032:cluster_71
WBPaper00025141:N2_Expressed_Genes
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00029437:dcr-1_upregulated
WBPaper00030985:Erwinia_carotovora_downregulated
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:24hr_muscle_depleted
WBPaper00031003:total_muscle_depleted
WBPaper00031532:Larva_Pan_Neuronal_Depleted
WBPaper00031832:slr-2_regulated
WBPaper00034661:AgNPs_downregulated
WBPaper00035873:dpy-9_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00035873:osm-8_regulated
WBPaper00036123:Cadmium_regulated
WBPaper00036286:Pattern_C
WBPaper00037695:LD_3-day
WBPaper00038304:octr-1_regulated
WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2up
WBPaper00040210:Chlorpyrifos_16C_regulated
WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.5
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040858:eQTL_regulated_developing
WBPaper00040876:mir-35_downregulated
WBPaper00040963:Q100_down
WBPaper00040963:Q200_down
WBPaper00041002:HQ_3d_0.2mM_Up
WBPaper00041174:environmental
WBPaper00041174:genotype_environment_interaction
WBPaper00041174:genotypic
WBPaper00041174:genotypic_and_environmental
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
WBPaper00044091:Bpseudomallei_induced_8h
WBPaper00044091:Bpseudomallei_induced_12h
WBPaper00045673:colistin_upregulated
WBPaper00048989:N2_rapamycin_upregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
WBPaper00056330:mrps-5(RNAi)_upregulated
[cgc6390]:Cluster_A
[cgc6390]:Cluster_B
InteractionWBInteraction000551542
WBInteraction000553019
WBInteraction000580550
Map_infoPositivePositive_cloneC18D11Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIII13.2504
ReferenceWBPaper00062388
MethodGene