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WormBase Tree Display for Gene: WBGene00008031

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Name Class

WBGene00008031SMapS_parentSequenceC39E9
IdentityVersion1
NameSequence_nameC39E9.7
Molecular_nameC39E9.7
C39E9.7.1
CE49791
C39E9.7.2
Other_nameCELE_C39E9.7Accession_evidenceNDBBX284604
Public_nameC39E9.7
DB_infoDatabaseAceViewgene4N838
WormQTLgeneWBGene00008031
WormFluxgeneWBGene00008031
NDBlocus_tagCELE_C39E9.7
PanthergeneCAEEL|WormBase=WBGene00008031|UniProtKB=Q18544
familyPTHR45757
NCBIgene183346
RefSeqproteinNM_070110.5
TREEFAMTREEFAM_IDTF315412
TrEMBLUniProtAccQ18544
UniProt_GCRPUniProtAccQ18544
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:48WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (60)
RNASeq_FPKM (74)
GO_annotation00061611
00061612
00115994
00115995
OrthologWBGene00062719Caenorhabditis remaneiFrom_analysisOMA
TreeFam
WormBase-Compara
WBGene00062722Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00025018Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00164174Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00133328Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00194292Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
CBOVI.g11440Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g40Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g15252Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g13810Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g6974Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g2074Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g14395Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g19663Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g1344Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g2351Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_01298.g16196Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_07962.g21204Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_11329.g23177Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-C39E9.7Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold587.g4917Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold587.g4918Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00041.g2188Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00041.g2189Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_19430Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_014489Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g06621Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_40145900Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIV_pilon.g12212Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00274349Pristionchus pacificusFrom_analysisWormBase-Compara
Paralog (60)
Structured_descriptionAutomated_descriptionPredicted to enable transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC39E9.7
Corresponding_CDS_historyC39E9.7:wp109
C39E9.7:wp243
Corresponding_transcriptC39E9.7.1
C39E9.7.2
Other_sequence (11)
Associated_featureWBsf998320
WBsf998321
WBsf998322
WBsf1018479
WBsf1018480
WBsf231082
Experimental_infoRNAi_resultWBRNAi00011792Inferred_automaticallyRNAi_primary
WBRNAi00029693Inferred_automaticallyRNAi_primary
WBRNAi00042225Inferred_automaticallyRNAi_primary
Expr_patternExpr1013544
Expr1146216
Expr2001541
Expr2019762
Drives_constructWBCnstr00033292
Construct_productWBCnstr00033292
Microarray_resultsSMD_C39E9.7
SMD_C39E9.7:2
191576_at
A_12_P107881
Aff_C39E9.7
GPL13394_WBGene00008031
GPL13914_C39E9.7
GPL14144_C39E9.7_1014-1073_0.926_3_A
GPL14144_C39E9.7_763-822_0.880_21_C
GPL14144_C39E9.7_892-951_0.745_132_B
GPL19516_CGZ0008263
GPL21109_C39E9.7
GPL3518_CE05390
GPL8304_CE_WBGene00008031_A
GPL8673_C39E9_7P00207
GPL8673_C39E9_7P00566
GPL8673_C39E9_7P01215
GPL9450_C39E9.7
cea2.i.24184
Expression_clusterWBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:excretory-cell_larva_enriched
WBPaper00037950:excretory-cell_larva_SelectivelyEnriched
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_larva_SelectivelyEnriched
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00044736:flat_dev_expression
WBPaper00047131:daf-2(e1370)_upregulated_hel-1(gk148684)-background
WBPaper00047131:daf-2(e1370)_upregulated_N2-background
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00049942:hsf-1(RNAi)_upregulated
WBPaper00050370:dpy-21(e428)_L3_upregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00053388:dauer_regulated_Cluster2
WBPaper00053664:ins-11(tm1053)_upregulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00054410:set-9(rw5)_upregulated
WBPaper00054410:set-26(tm2467)_upregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rapamycin_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00055482:pmt-2(RNAi)_upregulated
WBPaper00055827:daf-2(e1370)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056617:adr-1_upregulated_embryo_transcript
WBPaper00057041:unc-70(cas983)_downregulated
WBPaper00057068:numr-1(RNAi)_downregulated_Cadmium
WBPaper00057143:ztf-11(RNAi)_upregulated
WBPaper00058948:npr-8(ok1439)_downregulated_OP50
WBPaper00058948:PA14_downregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059728:5ug_cholesterol_upregulated
WBPaper00060014:set-2(tm1630)_downregulated
WBPaper00060634:fhod-1(tm2363)_upregulated
WBPaper00061340:Excretory_cell
WBPaper00061341:28C_24h_upregulated
WBPaper00061341:28C_48h_upregulated
WBPaper00061405:S.aureus_downregulated_starvation
WBPaper00061439:unc-30(ok613)_upregulated
WBPaper00061479:hda-1(ne4752)_upregulated
WBPaper00061527:xbx-3-DH11.5_20397
WBPaper00061590:CGP37157_upregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062193:skn-1(RNAi)_upregulated
WBPaper00062197:mec-8_downregulated_TRN
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062446:nhr-8(hd117)_upregulated
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064637:cox-5B(RNAi)_upregulated
WBPaper00064716:paraquat_downregulated
WBPaper00065841:30_1
WBPaper00065841:33_0
WBPaper00065841:34_1
WBPaper00065841:79_1
WBPaper00065993:glp-1(e2141)_upregulated
cgc4489_group_16
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00031252:AIN-1_IP_enriched
WBPaper00035227:heat_shock_regulated
WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2up
WBPaper00040210:Chlorpyrifos_24C_regulated
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040858:eQTL_regulated_developing
WBPaper00040858:eQTL_regulated_juvenile
WBPaper00040963:Q100_down
WBPaper00040963:Q200_down
WBPaper00041939:control_vs_UVC-EtBr-exposed_24h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00042236:flcn-1(ok975)_upregulated
WBPaper00047070:N2_starvation_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
WBPaper00053827:pyoverdine_upregulated
[cgc6390]:Cluster_B
InteractionWBInteraction000580570
Map_infoPositivePositive_cloneC39E9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV7.80645
MethodGene